RNA–Protein interactions for RNA: YHL035C

VMR1, Transcript of Vacuolar membrane protein, yeastyeast

Gene VMR1, Length 4,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMR1YHL035C MDM35O60200 86 aa1.26□□□□□ -2.21
VMR1YHL035C YNL200CP40165 246 aaKnown RBP1.26□□□□□ -2.21
VMR1YHL035C BAT2P47176 376 aaKnown RBP1.26□□□□□ -2.21
VMR1YHL035C YLR460CP54007 376 aa1.26□□□□□ -2.21
VMR1YHL035C GPI17Q04080 534 aa1.26□□□□□ -2.21
VMR1YHL035C YLR162WQ06235 118 aa1.26□□□□□ -2.21
VMR1YHL035C ERJ5P43613 295 aaPredicted RBP1.26□□□□□ -2.21
VMR1YHL035C GIM5Q04493 163 aa1.26□□□□□ -2.21
VMR1YHL035C NOC4Q06512 552 aaPredicted RBP1.26□□□□□ -2.21
VMR1YHL035C DGA1Q08650 418 aa1.26□□□□□ -2.21
VMR1YHL035C VMA22P38784 181 aa1.25□□□□□ -2.21
VMR1YHL035C HPA3P39979 161 aa1.25□□□□□ -2.21
VMR1YHL035C KNH1P50112 268 aa1.25□□□□□ -2.21
VMR1YHL035C SPO13P23624 291 aa1.25□□□□□ -2.21
VMR1YHL035C EDC3P39998 551 aaKnown RBP1.25□□□□□ -2.21
VMR1YHL035C MPC3P53311 146 aa1.25□□□□□ -2.21
VMR1YHL035C VPS71Q03433 280 aa1.25□□□□□ -2.21
VMR1YHL035C YPR127WQ06494 345 aa1.25□□□□□ -2.21
VMR1YHL035C HKR1P41809 1802 aa1.25□□□□□ -2.21
VMR1YHL035C TAH1P25638 111 aaPredicted RBP1.25□□□□□ -2.21
VMR1YHL035C PAC10P48363 199 aa1.25□□□□□ -2.21
VMR1YHL035C NSA2P40078 261 aaKnown RBP1.25□□□□□ -2.21
VMR1YHL035C CWC27Q02770 301 aa1.25□□□□□ -2.21
VMR1YHL035C YLR053CQ12026 108 aa1.25□□□□□ -2.21
VMR1YHL035C DAS2Q12084 232 aa1.25□□□□□ -2.21
VMR1YHL035C TLG1Q03322 224 aa1.24□□□□□ -2.21
VMR1YHL035C YOR015WQ12169 119 aa1.24□□□□□ -2.21
VMR1YHL035C ARC19P33204 171 aaKnown RBP1.24□□□□□ -2.21
VMR1YHL035C GCY1P14065 312 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
VMR1YHL035C IDP1P21954 428 aaKnown RBP1.24□□□□□ -2.21
VMR1YHL035C SHH4Q06236 168 aa1.24□□□□□ -2.21
VMR1YHL035C YHR214C-EQ8TGK0 99 aa1.24□□□□□ -2.21
VMR1YHL035C POR1P04840 283 aaKnown RBP1.24□□□□□ -2.21
VMR1YHL035C IGO2Q9P305 131 aa1.24□□□□□ -2.21
VMR1YHL035C RAD50P12753 1312 aa1.24□□□□□ -2.21
VMR1YHL035C GPA2P10823 449 aa1.23□□□□□ -2.21
VMR1YHL035C YKR041WP36134 250 aa1.23□□□□□ -2.21
VMR1YHL035C RFC2P40348 353 aa1.23□□□□□ -2.21
VMR1YHL035C TTI2P47168 421 aa1.23□□□□□ -2.21
VMR1YHL035C AIM34Q03673 198 aa1.23□□□□□ -2.21
VMR1YHL035C YOL160WQ08321 113 aa1.23□□□□□ -2.21
VMR1YHL035C YKL102CP34249 101 aa1.23□□□□□ -2.21
VMR1YHL035C YFL019CP43576 117 aa1.23□□□□□ -2.21
VMR1YHL035C YDR274CP87283 123 aa1.23□□□□□ -2.21
VMR1YHL035C NSL1Q12143 216 aa1.23□□□□□ -2.21
VMR1YHL035C DGK1Q12382 290 aa1.23□□□□□ -2.21
VMR1YHL035C DUR1,2P32528 1835 aaKnown RBP1.23□□□□□ -2.21
VMR1YHL035C CMD1P06787 147 aaKnown RBP1.23□□□□□ -2.21
VMR1YHL035C APA2P22108 325 aa1.23□□□□□ -2.21
VMR1YHL035C RME1P32338 300 aaKnown RBP1.23□□□□□ -2.21
VMR1YHL035C SFK1P35735 353 aa1.23□□□□□ -2.21
VMR1YHL035C SNO1Q03144 224 aa1.23□□□□□ -2.21
VMR1YHL035C TIR1P10863 254 aa1.23□□□□□ -2.21
VMR1YHL035C YER076CP40049 302 aa1.23□□□□□ -2.21
VMR1YHL035C YJR111CP47148 283 aaKnown RBP1.23□□□□□ -2.21
VMR1YHL035C THG1P53215 237 aaKnown RBP1.23□□□□□ -2.21
VMR1YHL035C SPC25P40014 221 aa1.22□□□□□ -2.21
VMR1YHL035C GLR1P41921 483 aaKnown RBP1.22□□□□□ -2.21
VMR1YHL035C YNR077CP53758 84 aa1.22□□□□□ -2.21
VMR1YHL035C YOR381W-AQ3E804 55 aa1.22□□□□□ -2.21
VMR1YHL035C YOL162WP0CF19 215 aa1.22□□□□□ -2.21
VMR1YHL035C NQM1P53228 333 aaPredicted RBP1.22□□□□□ -2.21
VMR1YHL035C TMA20P89886 181 aaPredicted RBP1.22□□□□□ -2.21
VMR1YHL035C YHR007C-AQ07074 71 aa1.22□□□□□ -2.21
VMR1YHL035C BEM2P39960 2167 aaKnown RBP1.22□□□□□ -2.21
VMR1YHL035C PRP11Q07350 266 aaPredicted RBP1.22□□□□□ -2.21
VMR1YHL035C YPD1Q07688 167 aa1.22□□□□□ -2.21
VMR1YHL035C RPL22AP05749 121 aaKnown RBP1.21□□□□□ -2.21
VMR1YHL035C SOK1P40317 901 aa1.21□□□□□ -2.21
VMR1YHL035C ALB1P47019 175 aaPredicted RBP1.21□□□□□ -2.21
VMR1YHL035C YPR174CQ06616 221 aaPredicted RBP1.21□□□□□ -2.21
VMR1YHL035C ATP20Q12233 115 aa1.21□□□□□ -2.21
VMR1YHL035C EFG1Q3E705 233 aaKnown RBP1.21□□□□□ -2.21
VMR1YHL035C CUP9P41817 306 aa1.21□□□□□ -2.22
VMR1YHL035C YIP3P53633 176 aa1.21□□□□□ -2.22
VMR1YHL035C RCE1Q03530 315 aa1.21□□□□□ -2.22
VMR1YHL035C GRX8Q05926 109 aa1.21□□□□□ -2.22
VMR1YHL035C RAD28Q12021 506 aa1.21□□□□□ -2.22
VMR1YHL035C YHR086W-AQ3E746 53 aa1.21□□□□□ -2.22
VMR1YHL035C RPL2AP0CX45 254 aaKnown RBP1.21□□□□□ -2.22
VMR1YHL035C RPL2BP0CX46 254 aaKnown RBP1.21□□□□□ -2.22
VMR1YHL035C YFL065CP43539 102 aa1.21□□□□□ -2.22
VMR1YHL035C RNH202Q05635 350 aa1.21□□□□□ -2.22
VMR1YHL035C YOR214CQ12282 236 aa1.21□□□□□ -2.22
VMR1YHL035C RDI1Q12434 202 aa1.21□□□□□ -2.22
VMR1YHL035C GPI14P47088 403 aaKnown RBP1.2□□□□□ -2.22
VMR1YHL035C FAS2P19097 1887 aaKnown RBP1.2□□□□□ -2.22
VMR1YHL035C YBR219CP38317 127 aa1.2□□□□□ -2.22
VMR1YHL035C YCR023CP25351 611 aa1.2□□□□□ -2.22
VMR1YHL035C UBC8P28263 218 aa1.2□□□□□ -2.22
VMR1YHL035C DML1Q03652 475 aa1.2□□□□□ -2.22
VMR1YHL035C BRX1Q08235 291 aaKnown RBP1.2□□□□□ -2.22
VMR1YHL035C YBL010CP32788 280 aa1.2□□□□□ -2.22
VMR1YHL035C RPB7P34087 171 aa1.2□□□□□ -2.22
VMR1YHL035C GLC8P41818 229 aa1.2□□□□□ -2.22
VMR1YHL035C VMA10P48836 114 aaKnown RBP1.2□□□□□ -2.22
VMR1YHL035C YNL033WP53964 284 aa1.2□□□□□ -2.22
VMR1YHL035C IRC23Q08416 157 aa1.2□□□□□ -2.22
VMR1YHL035C HSP30P25619 332 aa1.19□□□□□ -2.22
VMR1YHL035C SRP102P36057 244 aaPredicted RBP1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms