RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C GTT2Q12390 233 aa2.5□□□□□ -2.01
MSM1YGR171C KRE5P22023 1365 aa2.49□□□□□ -2.01
MSM1YGR171C YAR023CD6VPM8 179 aa2.49□□□□□ -2.01
MSM1YGR171C ATP15P21306 62 aa2.49□□□□□ -2.01
MSM1YGR171C SRP21P32342 167 aa2.49□□□□□ -2.01
MSM1YGR171C TRS20P38334 175 aa2.49□□□□□ -2.01
MSM1YGR171C GPI2P46961 280 aa2.49□□□□□ -2.01
MSM1YGR171C YGR219WP53307 113 aa2.49□□□□□ -2.01
MSM1YGR171C YGL194C-AQ2V2P6 80 aa2.49□□□□□ -2.01
MSM1YGR171C FMT1P32785 401 aa2.48□□□□□ -2.01
MSM1YGR171C YKR032WP36127 104 aa2.48□□□□□ -2.01
MSM1YGR171C UMP1P38293 148 aa2.48□□□□□ -2.01
MSM1YGR171C YEA6P39953 335 aa2.48□□□□□ -2.01
MSM1YGR171C YFL019CP43576 117 aa2.48□□□□□ -2.01
MSM1YGR171C YGL193CP53097 103 aa2.48□□□□□ -2.01
MSM1YGR171C YDR274CP87283 123 aa2.48□□□□□ -2.01
MSM1YGR171C UIP4Q08926 304 aa2.48□□□□□ -2.01
MSM1YGR171C OCA6Q12454 224 aa2.48□□□□□ -2.01
MSM1YGR171C YCR075W-AQ3E830 75 aa2.48□□□□□ -2.01
MSM1YGR171C FMP49A0A023PZB3 126 aa2.48□□□□□ -2.01
MSM1YGR171C MSW1P04803 379 aa2.48□□□□□ -2.01
MSM1YGR171C RPS23AP0CX29 145 aaKnown RBP2.48□□□□□ -2.01
MSM1YGR171C RPS23BP0CX30 145 aa2.48□□□□□ -2.01
MSM1YGR171C SPT14P32363 452 aa2.48□□□□□ -2.01
MSM1YGR171C CSH1P38287 376 aa2.48□□□□□ -2.01
MSM1YGR171C NSE4P43124 402 aa2.48□□□□□ -2.01
MSM1YGR171C GON7P46984 123 aa2.48□□□□□ -2.01
MSM1YGR171C DIE2P50076 525 aa2.48□□□□□ -2.01
MSM1YGR171C CAB4P53332 305 aa2.48□□□□□ -2.01
MSM1YGR171C RSF2P46974 1380 aa2.47□□□□□ -2.01
MSM1YGR171C MMS1Q06211 1407 aa2.47□□□□□ -2.01
MSM1YGR171C RAD6P06104 172 aa2.47□□□□□ -2.01
MSM1YGR171C SCM4P32564 187 aa2.47□□□□□ -2.01
MSM1YGR171C NSA2P40078 261 aaKnown RBP2.47□□□□□ -2.01
MSM1YGR171C YER181CP40097 107 aa2.47□□□□□ -2.01
MSM1YGR171C CUP9P41817 306 aa2.47□□□□□ -2.01
MSM1YGR171C DOC1P53068 250 aa2.47□□□□□ -2.01
MSM1YGR171C YCL001W-AP87012 153 aa2.47□□□□□ -2.01
MSM1YGR171C ELC1Q03071 99 aa2.47□□□□□ -2.01
MSM1YGR171C YMR099CQ03161 297 aaKnown RBP2.47□□□□□ -2.01
MSM1YGR171C RSM10Q03201 203 aa2.47□□□□□ -2.01
MSM1YGR171C SPC3Q12133 184 aa2.47□□□□□ -2.01
MSM1YGR171C BOL1Q3E793 110 aa2.47□□□□□ -2.01
MSM1YGR171C YNL277W-AQ3E7Z0 62 aa2.47□□□□□ -2.01
MSM1YGR171C ADE6P38972 1358 aaKnown RBP2.47□□□□□ -2.01
MSM1YGR171C SHB17P36136 271 aaKnown RBP2.46□□□□□ -2.02
MSM1YGR171C VTC1P40046 129 aaRIP-Chip data2.46□□□□□ -2.02not detected
MSM1YGR171C SFT1P43682 97 aa2.46□□□□□ -2.02
MSM1YGR171C FIP1P45976 327 aa2.46□□□□□ -2.02
MSM1YGR171C SBH1P52870 82 aa2.46□□□□□ -2.02
MSM1YGR171C YSP2Q06681 1438 aa2.46□□□□□ -2.02
MSM1YGR171C YHR032W-AP0C5N6 59 aa2.45□□□□□ -2.02
MSM1YGR171C ANB1P19211 157 aa2.45□□□□□ -2.02
MSM1YGR171C ETR1P38071 380 aa2.45□□□□□ -2.02
MSM1YGR171C SNU13P39990 126 aaKnown RBP2.45□□□□□ -2.02
MSM1YGR171C YGL230CP53074 147 aa2.45□□□□□ -2.02
MSM1YGR171C YNL033WP53964 284 aa2.45□□□□□ -2.02
MSM1YGR171C YNL019CP53975 284 aa2.45□□□□□ -2.02
MSM1YGR171C SHH3Q04487 196 aa2.45□□□□□ -2.02
MSM1YGR171C YDR114CQ04597 100 aa2.45□□□□□ -2.02
MSM1YGR171C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
MSM1YGR171C LTE1P07866 1435 aa2.45□□□□□ -2.02
MSM1YGR171C GEA2P39993 1459 aaKnown RBP2.45□□□□□ -2.02
MSM1YGR171C SMC4Q12267 1418 aa2.45□□□□□ -2.02
MSM1YGR171C LYS2P07702 1392 aa2.45□□□□□ -2.02
MSM1YGR171C AGA2P32781 87 aa2.45□□□□□ -2.02
MSM1YGR171C YKR070WP36151 352 aaKnown RBP2.45□□□□□ -2.02
MSM1YGR171C YBR090CP38253 122 aa2.45□□□□□ -2.02
MSM1YGR171C HTD2P38790 280 aaKnown RBP2.45□□□□□ -2.02
MSM1YGR171C YER135CP40082 130 aa2.45□□□□□ -2.02
MSM1YGR171C RNH202Q05635 350 aa2.45□□□□□ -2.02
MSM1YGR171C NAT3Q06504 195 aa2.45□□□□□ -2.02
MSM1YGR171C YPR195CQ06594 109 aa2.45□□□□□ -2.02
MSM1YGR171C YLR042CQ07990 161 aa2.45□□□□□ -2.02
MSM1YGR171C TY1B-DR4Q07793 1604 aa2.44□□□□□ -2.02
MSM1YGR171C MRPL44P19956 98 aa2.44□□□□□ -2.02
MSM1YGR171C YHR130CP38834 111 aa2.44□□□□□ -2.02
MSM1YGR171C EAF6P47128 113 aa2.44□□□□□ -2.02
MSM1YGR171C SYM1Q06563 197 aa2.44□□□□□ -2.02
MSM1YGR171C RRT7Q07829 113 aa2.44□□□□□ -2.02
MSM1YGR171C HUT1Q12520 339 aa2.44□□□□□ -2.02
MSM1YGR171C KTI11Q3E840 82 aa2.44□□□□□ -2.02
MSM1YGR171C HSL1P34244 1518 aa2.43□□□□□ -2.02
MSM1YGR171C MYO4P32492 1471 aa2.43□□□□□ -2.02
MSM1YGR171C POR1P04840 283 aaKnown RBP2.43□□□□□ -2.02
MSM1YGR171C HYP2P23301 157 aaKnown RBP2.43□□□□□ -2.02
MSM1YGR171C YET1P35723 206 aa2.43□□□□□ -2.02
MSM1YGR171C ERV15P38312 142 aa2.43□□□□□ -2.02
MSM1YGR171C YHR140WP38842 239 aa2.43□□□□□ -2.02
MSM1YGR171C ERV14P53173 138 aa2.43□□□□□ -2.02
MSM1YGR171C YOR268CQ08734 132 aa2.43□□□□□ -2.02
MSM1YGR171C TY1B-HO13535 1793 aa2.43□□□□□ -2.02
MSM1YGR171C UBC5P15732 148 aa2.42□□□□□ -2.02
MSM1YGR171C YNL200CP40165 246 aaKnown RBP2.42□□□□□ -2.02
MSM1YGR171C PIR5P46999 287 aa2.42□□□□□ -2.02
MSM1YGR171C GAL83Q04739 417 aa2.42□□□□□ -2.02
MSM1YGR171C FAB1P34756 2278 aa2.42□□□□□ -2.02
MSM1YGR171C XRN1P22147 1528 aaKnown RBP2.42□□□□□ -2.02
MSM1YGR171C HSP12P22943 109 aaKnown RBP2.42□□□□□ -2.02
MSM1YGR171C RPL14AP36105 138 aaKnown RBP2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms