RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ANKEF1Q9NU02 776 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 TDP1Q9NUW8 608 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 MMP17Q9ULZ9 603 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 PCDHB8Q9UN66 801 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 CCL26Q9Y258 94 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 USP20Q9Y2K6 914 aa12.02□□□□□ -0.49
PTP4A1-207ENST00000639568 ABCA7Q8IZY2 2146 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 USO1O60763 962 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 SOAT2O75908 522 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 RPL6Q02878 288 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 GPR17Q13304 367 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 RNF20Q5VTR2 975 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 CENPPQ6IPU0 288 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 DHX32Q7L7V1 743 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 GLRX5Q86SX6 157 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 PDCD7Q8N8D1 485 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 MAB21L3Q8N8X9 362 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 DEPTORQ8TB45 409 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 SETD7Q8WTS6 366 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 USP13Q92995 863 aaPredicted RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 ATP2A3Q93084 1043 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 SLC26A6Q9BXS9 759 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 CRISPLD1Q9H336 500 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 KCNMB3Q9NPA1 279 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 GPRC5CQ9NQ84 441 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 DUS2Q9NX74 493 aaKnown RBP12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 PCDHA4Q9UN74 947 aa12.01□□□□□ -0.49
PTP4A1-207ENST00000639568 EML5Q05BV3 1969 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 OR6C75A6NL08 312 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 RRP8O43159 456 aaKnown RBP12□□□□□ -0.49
PTP4A1-207ENST00000639568 SLITRK3O94933 977 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 OAZ2O95190 189 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 VNN2O95498 520 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 ITPKBP27987 946 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 IFNAR2P48551 515 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 OSTNP61366 133 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 EXOSC10Q01780 885 aaKnown RBP12□□□□□ -0.49
PTP4A1-207ENST00000639568 INF2Q27J81 1249 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 PLEKHG6Q3KR16 790 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 ATF7IP2Q5U623 682 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 ARMCX5Q6P1M9 558 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 ATAD1Q8NBU5 361 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 MCPH1Q8NEM0 835 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 HMGB4Q8WW32 186 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 NACC1Q96RE7 527 aa12□□□□□ -0.49
PTP4A1-207ENST00000639568 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
PTP4A1-207ENST00000639568 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
PTP4A1-207ENST00000639568 NUP205Q92621 2012 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 TEX51A0A1B0GUA7 166 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 LYPLA2O95372 231 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 BAG4O95429 457 aaKnown RBP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 ATP2B1P20020 1258 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 DDX6P26196 483 aaKnown RBP eCLIP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 TUFMP49411 452 aaKnown RBP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 RARRES1P49788 294 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 ZNF33AQ06730 810 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 MAP7D1Q3KQU3 841 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 SLC36A4Q6YBV0 504 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 GPR155Q7Z3F1 870 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 MARCH9Q86YJ5 346 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 BLIDQ8IZY5 108 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 PIGOQ8TEQ8 1089 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 C18orf25Q96B23 403 aaPredicted RBP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 ARID3AQ99856 593 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 EIF2AK1Q9BQI3 630 aaKnown RBP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 LPIN3Q9BQK8 851 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 RNF26Q9BY78 433 aaPredicted RBP11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 PCOLCE2Q9UKZ9 415 aa11.99□□□□□ -0.49
PTP4A1-207ENST00000639568 THADAQ6YHU6 1953 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 MTMR11A4FU01 709 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 GOLGA8CPA6NN73 597 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 K7EQS6 105 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 CCNT1O60563 726 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 HLA-EP13747 358 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 GNSP15586 552 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 GCFC2P16383 781 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 HSPA4P34932 840 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 GRM5P41594 1212 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 EFNA5P52803 228 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 MRPS21P82921 87 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 MTF1Q14872 753 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 NECTIN1Q15223 517 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 MGAT5BQ3V5L5 792 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 TAF1BQ53T94 588 aaPredicted RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 XKR4Q5GH76 650 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 ALKAL1Q6UXT8 129 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 TMEM92Q6UXU6 159 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 SLFN12Q8IYM2 578 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 ALLCQ8N6M5 410 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 TXNDC5Q8NBS9 432 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 OSCP1Q8WVF1 389 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 ZMAT2Q96NC0 199 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 FAM124BQ9H5Z6 455 aaPredicted RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 IL21Q9HBE4 155 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 HSFX1Q9UBD0 423 aa11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 USP9XQ93008 2570 aaPredicted RBP11.98□□□□□ -0.49
PTP4A1-207ENST00000639568 A0A1W2PQD8 194 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 297.3 ms