RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 ATG2BQ96BY7 2078 aa20.5■□□□□ 0.87
SMN2-215ENST00000628696 RETP07949 1114 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 ATF6P18850 670 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 CDC25CP30307 473 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 SF3A1Q15459 793 aaKnown RBP20.49■□□□□ 0.87
SMN2-215ENST00000628696 WDR44Q5JSH3 913 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 LRRTM3Q86VH5 581 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 RTKNQ9BST9 563 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 IKZF4Q9H2S9 585 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 IL21Q9HBE4 155 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 THG1LQ9NWX6 298 aaKnown RBP20.49■□□□□ 0.87
SMN2-215ENST00000628696 ABI2Q9NYB9 513 aaPredicted RBP20.49■□□□□ 0.87
SMN2-215ENST00000628696 C2CD2Q9Y426 696 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.49■□□□□ 0.87
SMN2-215ENST00000628696 SDK1Q7Z5N4 2213 aa20.49■□□□□ 0.87
SMN2-215ENST00000628696 K7ESF4 209 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 DDIT3P35638 169 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 PLCB2Q00722 1185 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 DYMQ7RTS9 669 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.48■□□□□ 0.87
SMN2-215ENST00000628696 LONP2Q86WA8 852 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 POMGNT1Q8WZA1 660 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 SLC46A2Q9BY10 475 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 C2orf42Q9NWW7 574 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 DENND4CQ5VZ89 1909 aa20.48■□□□□ 0.87
SMN2-215ENST00000628696 HAPLN1P10915 354 aaPredicted RBP20.47■□□□□ 0.87
SMN2-215ENST00000628696 ITPRIPL2Q3MIP1 535 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 CEP68Q76N32 757 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 BRAPQ7Z569 592 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 SFR1Q86XK3 245 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 DCP1BQ8IZD4 617 aaKnown RBP20.47■□□□□ 0.87
SMN2-215ENST00000628696 SPPL2BQ8TCT7 592 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 C2orf15Q8WU43 125 aaKnown RBP20.47■□□□□ 0.87
SMN2-215ENST00000628696 GKN1Q9NS71 199 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.47■□□□□ 0.87
SMN2-215ENST00000628696 STYXL1Q9Y6J8 313 aa20.47■□□□□ 0.87
SMN2-215ENST00000628696 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.46■□□□□ 0.87
SMN2-215ENST00000628696 KPNA7A9QM74 516 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 WEE1P30291 646 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 HOXC13P31276 330 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 CNR2P34972 360 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 MCM2P49736 904 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 SMARCB1Q12824 385 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 POSTNQ15063 836 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 SV2CQ496J9 727 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 CRELD2Q6UXH1 353 aaPredicted RBP20.46■□□□□ 0.87
SMN2-215ENST00000628696 USP49Q70CQ1 688 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 ZNF720Q7Z2F6 126 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 EFCAB13Q8IY85 973 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 CMTM8Q8IZV2 173 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 MAB21L3Q8N8X9 362 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 EPSTI1Q96J88 318 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 CCSER1Q9C0I3 900 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 ST6GALNAC4Q9H4F1 302 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 SEMA4GQ9NTN9 838 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 TBC1D7Q9P0N9 293 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 PCDHB5Q9Y5E4 795 aa20.46■□□□□ 0.87
SMN2-215ENST00000628696 LRP3O75074 770 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 IL18RAPO95256 599 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 PAPSS2O95340 614 aaPredicted RBP20.45■□□□□ 0.86
SMN2-215ENST00000628696 AVPR1AP37288 418 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 TFAMQ00059 246 aaKnown RBP20.45■□□□□ 0.86
SMN2-215ENST00000628696 CCINQ13939 588 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 PTPAQ15257 358 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 SYNPOQ8N3V7 929 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 ZNF560Q96MR9 790 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 PI4K2AQ9BTU6 479 aa20.45■□□□□ 0.86
SMN2-215ENST00000628696 MRPL44Q9H9J2 332 aaKnown RBP20.45■□□□□ 0.86
SMN2-215ENST00000628696 MAGED2Q9UNF1 606 aaPredicted RBP20.45■□□□□ 0.86
SMN2-215ENST00000628696 TPRP12270 2363 aaKnown RBP20.44■□□□□ 0.86
SMN2-215ENST00000628696 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
SMN2-215ENST00000628696 PRPF40AO75400 957 aaKnown RBP20.44■□□□□ 0.86
SMN2-215ENST00000628696 ADSSP30520 456 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 NLRP12P59046 1061 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 TSPY1Q01534 308 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 BFSP1Q12934 665 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 FAM160A2Q8N612 972 aaPredicted RBP20.44■□□□□ 0.86
SMN2-215ENST00000628696 STKLD1Q8NE28 680 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 NETO1Q8TDF5 533 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 CNTNAP3BQ96NU0 1288 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 FAM213AQ9BRX8 229 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 CNTNAP3Q9BZ76 1288 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 UPF2Q9HAU5 1272 aaKnown RBP20.44■□□□□ 0.86
SMN2-215ENST00000628696 TMLHEQ9NVH6 421 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 CCDC39Q9UFE4 941 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 AGAP1Q9UPQ3 857 aa20.44■□□□□ 0.86
SMN2-215ENST00000628696 EXTL3O43909 919 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 F11P03951 625 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 POLR2BP30876 1174 aaKnown RBP20.43■□□□□ 0.86
SMN2-215ENST00000628696 GPR15P49685 360 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 POU5F1Q01860 360 aaKnown RBP20.43■□□□□ 0.86
SMN2-215ENST00000628696 KCNA1Q09470 495 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 RUNX3Q13761 415 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 CSRP2Q16527 193 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 SDHAF4Q5VUM1 108 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 TXNDC8Q6A555 127 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 TRIM68Q6AZZ1 485 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 PRR23CQ6ZRP0 262 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 TMEM150AQ86TG1 271 aa20.43■□□□□ 0.86
SMN2-215ENST00000628696 NT5DC4Q86YG4 428 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms