RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 TIMM13Q9Y5L4 95 aaPredicted RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 FHOD1Q9Y613 1164 aa11.38□□□□□ -0.59
SMAD4-214ENST00000592186 PDCD11Q14690 1871 aaKnown RBP11.38□□□□□ -0.59
SMAD4-214ENST00000592186 F8VZ95 297 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 EPHB6O15197 1021 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TBC1D4O60343 1298 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ARHGEF15O94989 841 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 FERP16591 822 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 SOX5P35711 763 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 USP8P40818 1118 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 NDST1P52848 882 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 JAM2P57087 298 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 APBA1Q02410 837 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TBX2Q13207 712 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 PSMD5Q16401 504 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 RTP2Q5QGT7 225 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 GJB7Q6PEY0 223 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TMEM270Q6UE05 265 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 UBR7Q8N806 425 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 OR8K1Q8NGG5 319 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 LNX1Q8TBB1 728 aaPredicted RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 MICAL1Q8TDZ2 1067 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 CPLX3Q8WVH0 158 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 POF1BQ8WVV4 589 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ARNTL2Q8WYA1 636 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ELMO3Q96BJ8 720 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 HEXIM2Q96MH2 286 aaKnown RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ARID3AQ99856 593 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TCF25Q9BQ70 676 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 EMILIN2Q9BXX0 1053 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TTYH3Q9C0H2 523 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ZBP1Q9H171 429 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 SDCBP2Q9H190 292 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 RXFP1Q9HBX9 757 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 ZNHIT6Q9NWK9 470 aaKnown RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 LMCD1Q9NZU5 365 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 BZW2Q9Y6E2 419 aaKnown RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
SMAD4-214ENST00000592186 PTPRSQ13332 1948 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 TRIP11Q15643 1979 aa11.37□□□□□ -0.59
SMAD4-214ENST00000592186 AKR1B15C9JRZ8 316 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 GRM6O15303 877 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 MED7O43513 233 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 LILRB3O75022 631 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 GYPCP04921 128 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 PDGFRBP09619 1106 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 VDRP11473 427 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 PTPN1P18031 435 aaKnown RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 LMO2P25791 158 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 CASP14P31944 242 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 KRT9P35527 623 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 RAP1GAPP47736 663 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 RAD23BP54727 409 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 STILQ15468 1287 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 NFE2Q16621 373 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 PTPN21Q16825 1174 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 SFMBT2Q5VUG0 894 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 TPGS2Q68CL5 300 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 SLC8B1Q6J4K2 584 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 RBBP8NLQ8NC74 664 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 C2orf15Q8WU43 125 aaKnown RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 BAP1Q92560 729 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 KAT5Q92993 513 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 PPP2R3CQ969Q6 453 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 RRAGDQ9NQL2 400 aaPredicted RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 ENTPD7Q9NQZ7 604 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 MTRRQ9UBK8 725 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 PDE4DIPQ5VU43 2346 aa11.36□□□□□ -0.59
SMAD4-214ENST00000592186 RANBP2P49792 3224 aaKnown RBP11.36□□□□□ -0.59
SMAD4-214ENST00000592186 CYP26A1O43174 497 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ADH1AP07327 375 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 HNRNPH3P31942 346 aaKnown RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 NDUFV1P49821 464 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF132P52740 706 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 GSDMDP57764 484 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 GPR17Q13304 367 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 RAB33AQ14088 237 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ARID5BQ14865 1188 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 PTPN14Q15678 1187 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 INTS6LQ5JSJ4 861 aaKnown RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 FAM171BQ6P995 826 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 C4orf50Q6ZRC1 276 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF677Q86XU0 584 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 SLC4A11Q8NBS3 891 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 B3GALNT2Q8NCR0 500 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZNF461Q8TAF7 563 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 MYCBPAPQ8TBZ2 947 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 WHAMMQ8TF30 809 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 MRPL38Q96DV4 380 aaKnown RBP11.35□□□□□ -0.59
SMAD4-214ENST00000592186 B3GALT6Q96L58 329 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 DNAJC7Q99615 494 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 RTP3Q9BQQ7 232 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 SYT15Q9BQS2 421 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 GPR88Q9GZN0 384 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ELOVL4Q9GZR5 314 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 ZCWPW1Q9H0M4 648 aa11.35□□□□□ -0.59
SMAD4-214ENST00000592186 PDCL3Q9H2J4 239 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms