RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 CALN1Q9BXU9 219 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ZFP14Q9HCL3 533 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FAM105AQ9NUU6 356 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 BFARQ9NZS9 450 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 SLC30A1Q9Y6M5 507 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PLCH1Q4KWH8 1693 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HIST1H2AGP0C0S8 130 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HIST1H2ADP20671 130 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PTPN3P26045 913 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 GCLMP48507 274 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PSMD6Q15008 389 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HEATR6Q6AI08 1181 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 TYW1BQ6NUM6 668 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FAM133AQ8N9E0 248 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 NXPE3Q969Y0 559 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HIST1H2AHQ96KK5 128 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HIST1H2AJQ99878 128 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 H2AFJQ9BTM1 129 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 CINPQ9BW66 212 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 RBPJLQ9UBG7 517 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 GTF2IRD1Q9UHL9 959 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 H3BM21 787 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 NPC1O15118 1278 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ANXA9O76027 345 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 MYO1DO94832 1006 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 SPIRE1Q08AE8 756 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 UGP2Q16851 508 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PPP1R15BQ5SWA1 713 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ZNF438Q7Z4V0 828 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ABCC13Q9NSE7 274 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FRMD3A2A2Y4 597 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 H0YHG0 523 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 IGSF6O95976 241 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ASLP04424 464 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ATP1A1P05023 1023 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PFKLP17858 780 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 RGS4P49798 205 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FXR1P51114 621 aaKnown RBP eCLIP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 C8orf74Q6P047 294 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 MAMDC4Q6UXC1 1216 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 CCDC186Q7Z3E2 898 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ZSCAN30Q86W11 494 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 RHOT1Q8IXI2 618 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 HJURPQ8NCD3 748 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 IRF7Q92985 503 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 ATP6V1E2Q96A05 226 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 LENG9Q96B70 501 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 KAZALD1Q96I82 304 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 REEP2Q9BRK0 252 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 C2orf49Q9BVC5 232 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 STK33Q9BYT3 514 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 CPVLQ9H3G5 476 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 NSUN3Q9H649 340 aaKnown RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 C8orf33Q9H7E9 229 aaPredicted RBP6.61□□□□□ -1.35
SMAD4-212ENST00000591126 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.61□□□□□ -1.352e-6■■■■■ 30.8
SMAD4-212ENST00000591126 NCDNQ9UBB6 729 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
SMAD4-212ENST00000591126 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 LRRD1A4D1F6 860 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TBC1D3BA6NDS4 549 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 LRRC72A6NJI9 287 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 C3orf70A6NLC5 250 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TADA3O75528 432 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TIMP1P01033 207 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 RHOCP08134 193 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ARP10275 920 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 KRT3P12035 628 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 DNAJB2P25686 324 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ADCY8P40145 1251 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NPTX2P47972 431 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CCR3P51677 355 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HDAC4P56524 1084 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PTENP60484 403 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 RPS6KA2Q15349 733 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 EOGTQ5NDL2 527 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CCDC13Q8IYE1 715 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 RNF10Q8N5U6 811 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PABPC5Q96DU9 382 aaKnown RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CEP295NLQ96MC4 621 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ADGRE3Q9BY15 652 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 MRGBPQ9NV56 204 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PKP3Q9Y446 797 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PCDHA11Q9Y5I1 949 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TMEM265A0A087WTH1 108 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ZRANB2O95218 330 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 MOCS2O96007 188 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HLA-DRAP01903 254 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 ITGB3P05106 788 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 CCR1P32246 355 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HTR7P34969 479 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 HALP42357 657 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 NPEPPSP55786 919 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 TAF1BQ53T94 588 aaPredicted RBP6.6□□□□□ -1.35
SMAD4-212ENST00000591126 PLA2G4FQ68DD2 849 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 GRAMD4Q6IC98 578 aa6.6□□□□□ -1.35
SMAD4-212ENST00000591126 MFSD5Q6N075 450 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms