RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 ZNF516Q92618 1163 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 LPIN3Q9BQK8 851 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 SLITRK6Q9H5Y7 841 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 TMLHEQ9NVH6 421 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 PCDHB5Q9Y5E4 795 aa17.85■□□□□ 0.45
SREBF1-219ENST00000580540 NRG2O14511 850 aaPredicted RBP17.84■□□□□ 0.45
SREBF1-219ENST00000580540 HCRTO43612 131 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 AVPR2P30518 371 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 LHX1P48742 406 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 KCNB1Q14721 858 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 VEPH1Q14D04 833 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 TEAD2Q15562 447 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 ITIH5Q86UX2 942 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 SPPL2BQ8TCT7 592 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 PLEKHO2Q8TD55 490 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 GPR152Q8TDT2 470 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 C2orf15Q8WU43 125 aaKnown RBP17.84■□□□□ 0.45
SREBF1-219ENST00000580540 ACBD6Q9BR61 282 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 PI4K2AQ9BTU6 479 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 DMAC2Q9NW81 257 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 FRMD4BQ9Y2L6 1034 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 ASB3Q9Y575 518 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 ZDBF2Q9HCK1 2354 aa17.84■□□□□ 0.45
SREBF1-219ENST00000580540 A0A1W2PRU2 124 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 PDGFRBP09619 1106 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 HAPLN1P10915 354 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 PCSK1P29120 753 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 TNNC1P63316 161 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 GPC5P78333 572 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 FAM160A1Q05DH4 1040 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 SMARCB1Q12824 385 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 NFE2Q16621 373 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 WDR72Q3MJ13 1102 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 INTS6LQ5JSJ4 861 aaKnown RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 IER5LQ5T953 404 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 TANGO2Q6ICL3 276 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 POTEHQ6S545 545 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 SLC9A9Q8IVB4 645 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 SMYD4Q8IYR2 804 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 SHKBP1Q8TBC3 707 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 PARD3BQ8TEW8 1205 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 ZSWIM3Q96MP5 696 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 GZF1Q9H116 711 aaPredicted RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 HSFX1Q9UBD0 423 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 NXF1Q9UBU9 619 aaKnown RBP17.83■□□□□ 0.44
SREBF1-219ENST00000580540 WNT16Q9UBV4 365 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 GTF3C4Q9UKN8 822 aa17.83■□□□□ 0.44
SREBF1-219ENST00000580540 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-219ENST00000580540 MOSPD3O75425 235 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 MICAL2O94851 1124 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 ATF6P18850 670 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 NR2F2P24468 414 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 EPHA5P54756 1037 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 MYL6P60660 151 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 SNW1Q13573 536 aaKnown RBP17.82■□□□□ 0.44
SREBF1-219ENST00000580540 CCDC142Q17RM4 750 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 FAM78AQ5JUQ0 283 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 DPH6Q7L8W6 267 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 GUF1Q8N442 669 aaKnown RBP17.82■□□□□ 0.44
SREBF1-219ENST00000580540 ERCC4Q92889 916 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-219ENST00000580540 PSMG2Q969U7 264 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 FAM122AQ96E09 287 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 PLA2G2FQ9BZM2 168 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 SNX25Q9H3E2 840 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 ATXN3LQ9H3M9 355 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 ZFP14Q9HCL3 533 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 ZNF334Q9HCZ1 680 aaPredicted RBP17.82■□□□□ 0.44
SREBF1-219ENST00000580540 RMND1Q9NWS8 449 aa17.82■□□□□ 0.44
SREBF1-219ENST00000580540 MYBPHLA2RUH7 354 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 GABRDO14764 452 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 ATP2C2O75185 946 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SMC2O95347 1197 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 CYP2F1P24903 491 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 LMO2P25791 158 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 GABRR2P28476 465 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 GPR15P49685 360 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 AP3M2P53677 418 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 PSMC1P62191 440 aaKnown RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 DLG4P78352 724 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SDHAF4Q5VUM1 108 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 ASTLQ6HA08 431 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 TMC8Q8IU68 726 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SPATA2LQ8IUW3 424 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 GPIHBP1Q8IV16 184 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 ENGASEQ8NFI3 743 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 OR6B3Q8NGW1 331 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SPATA18Q8TC71 538 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 KBTBD7Q8WVZ9 684 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SYT15Q9BQS2 421 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 MRPL45Q9BRJ2 306 aaKnown RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 LRRC3Q9BY71 257 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 SLC2A4RGQ9NR83 387 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 HOOK1Q9UJC3 728 aaKnown RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 CIZ1Q9ULV3 898 aaPredicted RBP17.81■□□□□ 0.44
SREBF1-219ENST00000580540 TRAF3IP3Q9Y228 551 aa17.81■□□□□ 0.44
SREBF1-219ENST00000580540 KRBA1A5PL33 1030 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 ECI2O75521 394 aa17.8■□□□□ 0.44
SREBF1-219ENST00000580540 WARSP23381 471 aaKnown RBP17.8■□□□□ 0.44
SREBF1-219ENST00000580540 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms