RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 STK24Q9Y6E0 443 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 PHLPP2Q6ZVD8 1323 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 DSPP15924 2871 aaKnown RBP6.42□□□□□ -1.38
SMG6-219ENST00000575663 CELSR3Q9NYQ7 3312 aa6.42□□□□□ -1.38
SMG6-219ENST00000575663 FLNBO75369 2602 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 A0A087WV48 116 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 OTOL1A6NHN0 477 aaPredicted RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 M0QZQ0 153 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ARHGAP33O14559 1287 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ATXN7O15265 892 aaPredicted RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 OAZ2O95190 189 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 VNN2O95498 520 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 PRB1P04280 392 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 EDN1P05305 212 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ITPKAP23677 461 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 U2AF2P26368 475 aaKnown RBP eCLIP6.41□□□□□ -1.382e-8■■■□□ 17.8
SMG6-219ENST00000575663 HSPA4P34932 840 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 SEC13P55735 322 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CCT2P78371 535 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 MTF1Q14872 753 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CRY1Q16526 586 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 TSGA10IPQ3SY00 556 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 HSF5Q4G112 596 aaPredicted RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 C2orf27AQ580R0 203 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 OVOS1Q6IE37 1185 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CENPPQ6IPU0 288 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ALKAL1Q6UXT8 129 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 DSTYKQ6XUX3 929 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 PIK3AP1Q6ZUJ8 805 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 TOGARAM2Q6ZUX3 1019 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CEP120Q8N960 986 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 SPRYD3Q8NCJ5 442 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 OSCP1Q8WVF1 389 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 MRPS31Q92665 395 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 DRC1Q96MC2 740 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ZMAT2Q96NC0 199 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 KIF2CQ99661 725 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 HSD17B14Q9BPX1 270 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 LPIN3Q9BQK8 851 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 KIFC3Q9BVG8 833 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CDT1Q9H211 546 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CRISPLD1Q9H336 500 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 CAPN10Q9HC96 672 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 FBRSL1Q9HCM7 1045 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 TMEM74BQ9NUR3 256 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 DUS2Q9NX74 493 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 PPP4R2Q9NY27 417 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 PILRBQ9UKJ0 227 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 USP20Q9Y2K6 914 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 SLC27A5Q9Y2P5 690 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 ITPR1Q14643 2758 aa6.41□□□□□ -1.38
SMG6-219ENST00000575663 PDCD11Q14690 1871 aaKnown RBP6.41□□□□□ -1.38
SMG6-219ENST00000575663 ARHGEF35A5YM69 484 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 J3QKU1 62 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 K7ERI5 159 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 XPOTO43592 962 aaKnown RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 SH3BP5O60239 455 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 SOAT2O75908 522 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 C1QL1O75973 258 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 LARGE1O95461 756 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 NFATC1O95644 943 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 MCF2P10911 925 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 ODC1P11926 461 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 CD59P13987 128 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TYMPP19971 482 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 MRPS21P82921 87 aaKnown RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 RPL6Q02878 288 aaKnown RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 FAM160A1Q05DH4 1040 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 SMARCB1Q12824 385 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 ZNF268Q14587 947 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 NPY5RQ15761 445 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 CALCRLQ16602 461 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 EOGTQ5NDL2 527 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 NT5DC1Q5TFE4 455 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 NAIF1Q69YI7 327 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 BLOC1S2Q6QNY1 142 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 SLC36A4Q6YBV0 504 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 GALNT15Q8N3T1 639 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TTC9BQ8N6N2 239 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 PNPLA1Q8N8W4 532 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 MAB21L3Q8N8X9 362 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 ATAD1Q8NBU5 361 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TTC16Q8NEE8 873 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 PIP4K2CQ8TBX8 421 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 RLN3Q8WXF3 142 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 BSNDQ8WZ55 320 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 EZH1Q92800 747 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 KIFAP3Q92845 792 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 USP13Q92995 863 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 C18orf25Q96B23 403 aaPredicted RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 DCBLD2Q96PD2 775 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 FNBP1Q96RU3 617 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 TCHPQ9BT92 498 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 SLC46A2Q9BY10 475 aa6.4□□□□□ -1.38
SMG6-219ENST00000575663 MRPL4Q9BYD3 311 aaKnown RBP6.4□□□□□ -1.38
SMG6-219ENST00000575663 TTC12Q9H892 705 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms