RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PSMG2Q969U7 264 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 RSPRY1Q96DX4 576 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 SPATA32Q96LK8 384 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 LPIN3Q9BQK8 851 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 MKNK1Q9BUB5 465 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 DDX23Q9BUQ8 820 aaKnown RBP15.77■□□□□ 0.12
FANCA-220ENST00000566409 GDAP2Q9NXN4 497 aa15.77■□□□□ 0.12
FANCA-220ENST00000566409 OBSL1O75147 1896 aa15.77■□□□□ 0.11
FANCA-220ENST00000566409 CFAP54Q96N23 3096 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 TICRRQ7Z2Z1 1910 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 ZNF292O60281 2723 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 FAM237AA0A1B0GTK4 181 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 DCNP07585 359 aaKnown RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 TMEM191BP0C7N4 346 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 CYP2J2P51589 502 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 KRT85P78386 507 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 BFSP1Q12934 665 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 GRM2Q14416 872 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 MLF2Q15773 248 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 SOWAHAQ2M3V2 549 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 VITQ6UXI7 678 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 CEP57L1Q8IYX8 460 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 KIAA0895Q8NCT3 520 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 ZSCAN18Q8TBC5 510 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 ATOH1Q92858 354 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 PKMYT1Q99640 499 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 SEPT5Q99719 369 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 TRPV4Q9HBA0 871 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 ZFP14Q9HCL3 533 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 MTF2Q9Y483 593 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 ASB3Q9Y575 518 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 SNX9Q9Y5X1 595 aa15.76■□□□□ 0.11
FANCA-220ENST00000566409 NUP210Q8TEM1 1887 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 PTPRZ1P23471 2315 aaPredicted RBP15.76■□□□□ 0.11
FANCA-220ENST00000566409 FAM186AA6NE01 2351 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 GABRDO14764 452 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 HUS1O60921 280 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 CST3P01034 146 aaPredicted RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 HAPLN1P10915 354 aaPredicted RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 CD72P21854 359 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 ACAT1P24752 427 aaKnown RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 TUFMP49411 452 aaKnown RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 NDUFA8P51970 172 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 CYP24A1Q07973 514 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 SURF1Q15526 300 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 KNOP1Q1ED39 458 aaKnown RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 DUOXA2Q1HG44 320 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 MGAT5BQ3V5L5 792 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 KMT5BQ4FZB7 885 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 GPIHBP1Q8IV16 184 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 WDR49Q8IV35 697 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 C12orf56Q8IXR9 622 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 TMEM86AQ8N2M4 240 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 XXYLT1Q8NBI6 393 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 PLEKHO2Q8TD55 490 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 C2orf15Q8WU43 125 aaKnown RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 ZNF516Q92618 1163 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 CCDC127Q96BQ5 260 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 ANKRD36BP1Q96IX9 119 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 LRRC3BQ96PB8 259 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 ACBD6Q9BR61 282 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 IL21Q9HBE4 155 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 DDX43Q9NXZ2 648 aaKnown RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 ABI2Q9NYB9 513 aaPredicted RBP15.75■□□□□ 0.11
FANCA-220ENST00000566409 SIT1Q9Y3P8 196 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 FRYLO94915 3013 aa15.75■□□□□ 0.11
FANCA-220ENST00000566409 PTPRDP23468 1912 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 GREB1Q4ZG55 1949 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 KANSL1LA0AUZ9 987 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 GPR15P49685 360 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
FANCA-220ENST00000566409 PFKPQ01813 784 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 PRKCQQ04759 706 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 SMARCB1Q12824 385 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 PSMD6Q15008 389 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 HS2ST1Q7LGA3 356 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 TRAPPC11Q7Z392 1133 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 TMEM150AQ86TG1 271 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 DCP1BQ8IZD4 617 aaKnown RBP15.74■□□□□ 0.11
FANCA-220ENST00000566409 TOP6BLQ8N6T0 577 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 PJA1Q8NG27 643 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 SPPL2BQ8TCT7 592 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 GIPC2Q8TF65 315 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 KBTBD7Q8WVZ9 684 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 HPDLQ96IR7 371 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 IRF2BPLQ9H1B7 796 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 HEBP1Q9NRV9 189 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 GTF3C4Q9UKN8 822 aa15.74■□□□□ 0.11
FANCA-220ENST00000566409 ZNF638Q14966 1978 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 EP300Q09472 2414 aaPredicted RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 GVINP1Q7Z2Y8 2422 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 SPTBN4Q9H254 2564 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 TNNC2P02585 160 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 PRR29P0C7W0 189 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 DLATP10515 647 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 HMGA1P17096 107 aaKnown RBP15.73■□□□□ 0.11
FANCA-220ENST00000566409 PSMC3P17980 439 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 LMO2P25791 158 aa15.73■□□□□ 0.11
FANCA-220ENST00000566409 GABRR2P28476 465 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms