RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ANLNQ9NQW6 1124 aa7.08□□□□□ -1.28
HERPUD1-208ENST00000563911 RCAN3Q9UKA8 241 aa7.08□□□□□ -1.28
HERPUD1-208ENST00000563911 FAM184BQ9ULE4 1060 aa7.08□□□□□ -1.28
HERPUD1-208ENST00000563911 VWA7Q9Y334 891 aa7.08□□□□□ -1.28
HERPUD1-208ENST00000563911 ZDHHC9Q9Y397 364 aa7.08□□□□□ -1.28
HERPUD1-208ENST00000563911 LOC100996750A0A140TA64 210 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 A0A1B0GTL3 188 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 VSTM5A8MXK1 200 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 FFAR3O14843 346 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 LY86O95711 162 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 PDCP20941 246 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 MCAMP43121 646 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 AFF3P51826 1226 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 RRADP55042 308 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 SESN2P58004 480 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 LINC00310P59036 64 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 CHAF1AQ13111 956 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 TNFAIP1Q13829 316 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 NOMO1Q15155 1222 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 RALBP1Q15311 655 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 KCNA10Q16322 511 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 LRRC24Q50LG9 513 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 ARHGAP29Q52LW3 1261 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 BEND3Q5T5X7 828 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 OGFOD2Q6N063 350 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 LDHAL6AQ6ZMR3 332 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 LARP4Q71RC2 724 aaKnown RBP eCLIP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 RIN2Q8WYP3 895 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 DACT3Q96B18 629 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 UIMC1Q96RL1 719 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 KRTAP4-6Q9BYQ5 205 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 BARX1Q9HBU1 254 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 GJD2Q9UKL4 321 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 ATRNL1Q5VV63 1379 aa7.07□□□□□ -1.28
HERPUD1-208ENST00000563911 PFASO15067 1338 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 A0A1W2PR48 441 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 CCDC154A6NI56 674 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 NPIPB6E9PJ23 425 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 AKR1B10O60218 316 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 PRAMEF4O60810 478 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 TSPAN15O95858 294 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 GAAP10253 952 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 RAP1GAPP47736 663 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 MRE11P49959 708 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 UBXN2AP68543 259 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 TCP10Q12799 353 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 IFIT5Q13325 482 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 ADAM15Q13444 863 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 PCOLCEQ15113 449 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 CCDC184Q52MB2 194 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 CDC42EP5Q6NZY7 148 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 FAM83AQ86UY5 434 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 REXO1L1PQ8IX06 675 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 CARFQ8N187 725 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 VGLL2Q8N8G2 317 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 TXNDC5Q8NBS9 432 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 GPR156Q8NFN8 814 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 LINS1Q8NG48 757 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 DNAAF4Q8WXU2 420 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 GTPBP4Q9BZE4 634 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 KATNBL1Q9H079 304 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 RBM12Q9NTZ6 932 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 SCOCQ9UIL1 159 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 MGAMO43451 1857 aa7.06□□□□□ -1.28
HERPUD1-208ENST00000563911 RPTORQ8N122 1335 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 A0A0G2JLL6 359 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 PAX4O43316 350 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 HTRA2O43464 458 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 LTA4HP09960 611 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 CTSSP25774 331 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 HOXD10P28358 340 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 GNALP38405 381 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 MEF2AQ02078 507 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 RRP1BQ14684 758 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 USP10Q14694 798 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 UBE3CQ15386 1083 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 PKN1Q16512 942 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 VMACQ2NL98 169 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 TREML2Q5T2D2 321 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 FKBP1CQ5VVH2 108 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 LILRA6Q6PI73 481 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 SLC4A10Q6U841 1118 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 USP45Q70EL2 814 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 GPR155Q7Z3F1 870 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 PRRT2Q7Z6L0 340 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 GRAMD1CQ8IYS0 662 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 TDHQ8IZJ6 230 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 KLHL36Q8N4N3 616 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 BHLHE22Q8NFJ8 381 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 KLHDC4Q8TBB5 520 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 SLC35G2Q8TBE7 412 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 ADAMTS17Q8TE56 1095 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 SUCLG2Q96I99 432 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 AJUBAQ96IF1 538 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 MAP3K14Q99558 947 aa7.05□□□□□ -1.28
HERPUD1-208ENST00000563911 MRIQ9BWK5 157 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms