RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 SV2CQ496J9 727 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 SGO2Q562F6 1265 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 LIN9Q5TKA1 542 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 ZNF598Q86UK7 904 aaKnown RBP20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RABGGTAQ92696 567 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RPGRIP1Q96KN7 1286 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 RSAD1Q9HA92 442 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 CACNG4Q9UBN1 327 aa20.76■□□□□ 0.91
RBFOX1-215ENST00000553186 MICAL2O94851 1124 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 COMTP21964 271 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 UNC93AQ86WB7 457 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 ECHDC2Q86YB7 292 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 C12orf29Q8N999 325 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 RGS18Q9NS28 235 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 ANAPC7Q9UJX3 599 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 TCRBV5S1A1TA0A578 114 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 FGFR1P11362 822 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 SKIP12755 728 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 ITIH3Q06033 890 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 LRRC8DQ7L1W4 858 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 RNF169Q8NCN4 708 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 CD101Q93033 1021 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 PBKQ96KB5 322 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 EPC1Q9H2F5 836 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 L1RE1Q9UN81 338 aa20.75■□□□□ 0.91
RBFOX1-215ENST00000553186 TMEM110-MUSTN1A8MSY1 372 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 CALB1P05937 261 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 SELPP16109 830 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 TUBB4BP68371 445 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 GPNMBQ14956 572 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 CFAP221Q4G0U5 840 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 PTPN20Q4JDL3 420 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 LCLAT1Q6UWP7 414 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 ACOT1Q86TX2 421 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 CPNE8Q86YQ8 564 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 OR6B3Q8NGW1 331 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 LINC01599Q8WXQ3 324 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 PGBD4Q96DM1 585 aa20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 MRPL47Q9HD33 250 aaKnown RBP20.74■□□□□ 0.91
RBFOX1-215ENST00000553186 C9IYK1 514 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 GPD2P43304 727 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 CCDC181Q5TID7 509 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 ERICH1Q86X53 443 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 SPATA4Q8NEY3 305 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 PARVAQ9NVD7 372 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 HCRTO43612 131 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 PAFAH1B1P43034 410 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 MNX1P50219 401 aaPredicted RBP20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 CLCNKBP51801 687 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 DCAF12L1Q5VU92 463 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 TOP6BLQ8N6T0 577 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 APPL2Q8NEU8 664 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 UBE2Q2Q8WVN8 375 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 ALG3Q92685 438 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 UBN1Q9NPG3 1134 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 SCINQ9Y6U3 715 aa20.73■□□□□ 0.91
RBFOX1-215ENST00000553186 M0QYV0 167 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 LMO2P25791 158 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 BFSP2Q13515 415 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 DPH6Q7L8W6 267 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 GPR161Q8N6U8 529 aaKnown RBP20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 C3orf58Q8NDZ4 430 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 KRT35Q92764 455 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 CPXM1Q96SM3 734 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 DPEP3Q9H4B8 488 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 TSPAN16Q9UKR8 245 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 A8MXQ7 604 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 MIF4GDA9UHW6 222 aaKnown RBP20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 MYO1FO00160 1098 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 PODXLO00592 558 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 INPPL1O15357 1258 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 HUS1O60921 280 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 NBNO60934 754 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 GNL1P36915 607 aaPredicted RBP20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 FAM189BP81408 668 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 PPP1R26Q5T8A7 1209 aaPredicted RBP20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 SLC24A5Q71RS6 500 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 CRYBG2Q8N1P7 616 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 RASGEF1CQ8N431 466 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 PDCL2Q8N4E4 241 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 ACTRT1Q8TDG2 376 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 PAAF1Q9BRP4 392 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 TJP2Q9UDY2 1190 aa20.72■□□□□ 0.91
RBFOX1-215ENST00000553186 GJB6O95452 261 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 POMCP01189 267 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 PFKMP08237 780 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 IBSPP21815 317 aaPredicted RBP20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 RPL9P32969 192 aaKnown RBP20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 PEX5P50542 639 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 C2orf54Q08AI8 447 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 STILQ15468 1287 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 UPP1Q16831 310 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 PKDCCQ504Y2 493 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 PPP1R15BQ5SWA1 713 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 ADGRF2Q8IZF7 708 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 UBA3Q8TBC4 463 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 FEZF2Q8TBJ5 459 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 CRISPLD2Q9H0B8 497 aa20.71■□□□□ 0.91
RBFOX1-215ENST00000553186 WNT8AQ9H1J5 351 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 912.3 ms