RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZHX3Q9H4I2 956 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ZSCAN32Q9NX65 697 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 CNTN3Q9P232 1028 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 KCNH3Q9ULD8 1083 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 DNM3Q9UQ16 869 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 INVSQ9Y283 1065 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 YIPF1Q9Y548 306 aa7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 ZFP37Q9Y6Q3 630 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 KIF26AQ9ULI4 1882 aaPredicted RBP7.45□□□□□ -1.22
PRPF40B-214ENST00000551320 COL4A2P08572 1712 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 OTOL1A6NHN0 477 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 SCAMP3O14828 347 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF263O14978 683 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 AXIN1O15169 862 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 TRAPPC3O43617 180 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 LILRB5O75023 590 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ADH1CP00326 375 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 NFICP08651 508 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 MCF2P10911 925 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 CHRNB1P11230 501 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 KCNE1P15382 129 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 MARCKSP29966 332 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ACOT2P49753 483 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 KPNA1P52294 538 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 FOXK2Q01167 660 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 PFKPQ01813 784 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 PUM1Q14671 1186 aaKnown RBP eCLIP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 NOLC1Q14978 699 aaKnown RBP eCLIP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 SF3A2Q15428 464 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ZC2HC1CQ53FD0 456 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 INTS6LQ5JSJ4 861 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 CYP4A22Q5TCH4 519 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 HAUS3Q68CZ6 603 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 JADE1Q6IE81 842 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC39A4Q6P5W5 647 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 DSTYKQ6XUX3 929 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 LRRTM3Q86VH5 581 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 TMC8Q8IU68 726 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ARID3BQ8IVW6 561 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 GPR65Q8IYL9 337 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 DEPDC4Q8N2C3 294 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 OR10T2Q8NGX3 314 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 SMARCD2Q92925 531 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF512Q96ME7 567 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 UROC1Q96N76 676 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 MKNK1Q9BUB5 465 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ATXN3LQ9H3M9 355 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 FBRSL1Q9HCM7 1045 aaKnown RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 PRMT8Q9NR22 394 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ASAH2Q9NR71 780 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 TOPORSQ9NS56 1045 aaPredicted RBP7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 GDE1Q9NZC3 331 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 FBXO4Q9UKT5 387 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 DOLKQ9UPQ8 538 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 CCL26Q9Y258 94 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 PHLPP2Q6ZVD8 1323 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 CITO14578 2027 aa7.44□□□□□ -1.22
PRPF40B-214ENST00000551320 ASPMQ8IZT6 3477 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 TTC26A0AVF1 554 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 H7C4K7 107 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 ARNTLO00327 626 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 DCLK1O15075 740 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 PLA2G4BP0C869 781 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 PLS3P13797 630 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 PSMC3P17980 439 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 ATF6P18850 670 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 GABRR2P28476 465 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC12A3P55017 1021 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 YWHAHQ04917 246 aaPredicted RBP7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 KCNA1Q09470 495 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 STRN3Q13033 797 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 PLD1Q13393 1074 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SIM2Q14190 667 aaPredicted RBP7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SLC39A12Q504Y0 691 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 GPR158Q5T848 1215 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 KRT79Q5XKE5 535 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 IQCEQ6IPM2 695 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 TCEAL6Q6IPX3 200 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 ZNF280DQ6N043 979 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 PDXDC1Q6P996 788 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 DTHD1Q6ZMT9 781 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 USP49Q70CQ1 688 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 HAUS6Q7Z4H7 955 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 DNAJB7Q7Z6W7 309 aaPredicted RBP7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 GPBP1Q86WP2 473 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 FAM200AQ8TCP9 573 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 NELL1Q92832 810 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 TCEAL3Q969E4 200 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SENP8Q96LD8 212 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SEPT5Q99719 369 aaPredicted RBP7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 REEP2Q9BRK0 252 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 CHRDQ9H2X0 955 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 SEMA4AQ9H3S1 761 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 TMLHEQ9NVH6 421 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 TBC1D7Q9P0N9 293 aa7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 AFF4Q9UHB7 1163 aaKnown RBP7.43□□□□□ -1.22
PRPF40B-214ENST00000551320 NOL7Q9UMY1 257 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms