RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 BHMG1C9JSJ3 638 aaPredicted RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 FAM189A1O60320 539 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 HBP1O60381 514 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CYP1A1P04798 512 aaPredicted RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 ZNF286BP0CG31 522 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ATP2A2P16615 1042 aaKnown RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 NOMO3P69849 1222 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CENPCQ03188 943 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 LMNB2Q03252 620 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ANKRD20A2Q5SQ80 823 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 LIN9Q5TKA1 542 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ANKRD20A1Q5TYW2 823 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ANKRD20A3Q5VUR7 823 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 WDR49Q8IV35 697 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 GPRC5AQ8NFJ5 357 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 FMO2Q99518 471 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 C2orf40Q9H1Z8 148 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 PDHXO00330 501 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CAND2O75155 1236 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CXCL8P10145 99 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 INSRRP14616 1297 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CTNNA2P26232 953 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ADORA2AP29274 412 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CHRNA3P32297 505 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 TFDP1Q14186 410 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 DUPD1Q68J44 220 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 MPZL3Q6UWV2 235 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 MON1BQ7L1V2 547 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 ZC3H15Q8WU90 426 aaKnown RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 ZNF606Q8WXB4 792 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 PAIP2Q9BPZ3 127 aaKnown RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 HEMGNQ9BXL5 484 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 OSBPL1AQ9BXW6 950 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 NSRP1Q9H0G5 558 aaKnown RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 RASAL2Q9UJF2 1139 aa12.22□□□□□ -0.45
USP35-207ENST00000530546 CPSF3Q9UKF6 684 aaKnown RBP12.22□□□□□ -0.45
USP35-207ENST00000530546 ASB14A6NK59 587 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ASS1P00966 412 aaKnown RBP12.21□□□□□ -0.45
USP35-207ENST00000530546 IQCF3P0C7M6 154 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ADCYAP1R1P41586 468 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 PTGIRP43119 386 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 CTCFP49711 727 aaPredicted RBP12.21□□□□□ -0.45
USP35-207ENST00000530546 MCL1Q07820 350 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 DHX34Q14147 1143 aaKnown RBP12.21□□□□□ -0.45
USP35-207ENST00000530546 PPP2R5EQ16537 467 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ZFYVE27Q5T4F4 411 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 GALNT15Q8N3T1 639 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 PPP1R13LQ8WUF5 828 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 AFG1LQ8WV93 481 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ATG4AQ8WYN0 398 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 FAM118BQ9BPY3 351 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 CISHQ9NSE2 258 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 POLIQ9UNA4 740 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 AKT3Q9Y243 479 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 A0A087WZ62 844 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 FAM187AA6NFU0 413 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ACKR2O00590 384 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 WFS1O76024 890 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 VTNP04004 478 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 HSPA6P17066 643 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 RAP1GAPP47736 663 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ARHGAP1Q07960 439 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ORC1Q13415 861 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 CLUL1Q15846 466 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 ZNF699Q32M78 642 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 KRT71Q3SY84 523 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 CMPK2Q5EBM0 449 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 TMC3Q7Z5M5 1100 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 FBXO25Q8TCJ0 367 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 TRIM11Q96F44 468 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 FDXACB1Q9BRP7 624 aaPredicted RBP12.21□□□□□ -0.45
USP35-207ENST00000530546 CCDC134Q9H6E4 229 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 AVENQ9NQS1 362 aaPredicted RBP12.21□□□□□ -0.45
USP35-207ENST00000530546 KLHL11Q9NVR0 708 aa12.21□□□□□ -0.45
USP35-207ENST00000530546 GAS2O43903 313 aaKnown RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 NPTXRO95502 500 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 LGALS2P05162 132 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 COILP38432 576 aaPredicted RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 ABL2P42684 1182 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 RPL21P46778 160 aaKnown RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 MRPS35P82673 323 aaKnown RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 TBC1D25Q3MII6 688 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 HOOK3Q86VS8 718 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 KCNN1Q92952 543 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 NAF1Q96HR8 494 aaKnown RBP12.21□□□□□ -0.46
USP35-207ENST00000530546 CPB2Q96IY4 423 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 HERPUD2Q9BSE4 406 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 NIF3L1Q9GZT8 377 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 CDT1Q9H211 546 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 PRDM16Q9HAZ2 1276 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 PNMA3Q9UL41 463 aa12.21□□□□□ -0.46
USP35-207ENST00000530546 ZNFX1Q9P2E3 1918 aaKnown RBP12.2□□□□□ -0.46
USP35-207ENST00000530546 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 LRRD1A4D1F6 860 aa12.2□□□□□ -0.46
USP35-207ENST00000530546 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms