RNA–Protein interactions for RNA: ENST00000530535.5

USP35-206, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 2,125 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-206ENST00000530535 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 TCF4P15884 667 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 SSTR3P32745 418 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 PIK3CAP42336 1068 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 SP2Q02086 613 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 STRN3Q13033 797 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 CUL2Q13617 745 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 P3H1Q32P28 736 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 WDR44Q5JSH3 913 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 LIN9Q5TKA1 542 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 PPP1R21Q6ZMI0 780 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 RIBC1Q8N443 379 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 KIF2BQ8N4N8 673 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 N4BP2L2Q92802 583 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 BICD1Q96G01 975 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 FOXP3Q9BZS1 431 aa16.42■□□□□ 0.22
USP35-206ENST00000530535 POLR3FQ9H1D9 316 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 JPH1Q9HDC5 661 aaPredicted RBP16.42■□□□□ 0.22
USP35-206ENST00000530535 TMEM88BA6NKF7 163 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 LIASO43766 372 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 CCNB1P14635 433 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 ADCY1Q08828 1119 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 CYP4F22Q6NT55 531 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 TRABD2AQ86V40 505 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 CCHCR1Q8TD31 782 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 ATP6V0A1Q93050 837 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 KLHL29Q96CT2 875 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 KIAA1586Q9HCI6 787 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 MRPL47Q9HD33 250 aaKnown RBP16.41■□□□□ 0.22
USP35-206ENST00000530535 KLHL11Q9NVR0 708 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 NKIRAS1Q9NYS0 192 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 IVNS1ABPQ9Y6Y0 642 aa16.41■□□□□ 0.22
USP35-206ENST00000530535 FAM47DPA6NHR8 397 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 A8MUI8 341 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 RASA4BC9J798 803 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TLR3O15455 904 aaKnown RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 RASA4O43374 803 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 ASMTLO95671 621 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TNNI1P19237 187 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 ADORA2AP29274 412 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 GNA15P30679 374 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 ZNF252P-AS1Q0IIN9 211 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 CCDC15Q0P6D6 951 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 NFX1Q12986 1120 aaKnown RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 TMED2Q15363 201 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TAF1CQ15572 869 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 DRICH1Q6PGQ1 229 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 EEPD1Q7L9B9 569 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 IFNL1Q8IU54 200 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 CCDC60Q8IWA6 550 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 DENND1AQ8TEH3 1009 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 CYP26B1Q9NR63 512 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 DNPEPQ9ULA0 475 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TRIM33Q9UPN9 1127 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 USTQ9Y2C2 406 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 L3MBTL1Q9Y468 752 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 DNALI1O14645 258 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 MAGEB2O15479 319 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TOMM70O94826 608 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TGFB3P10600 412 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 KRT10P13645 584 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 GJC1P36383 396 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 ACOT2P49753 483 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 LIG4P49917 911 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 PRKCEQ02156 737 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 ZBTB41Q5SVQ8 909 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 SWSAP1Q6NVH7 229 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TMEM270Q6UE05 265 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 GPR142Q7Z601 462 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 TDRPQ86YL5 185 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 FEZF2Q8TBJ5 459 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 PRCCQ92733 491 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 KCNN1Q92952 543 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 SLITRK1Q96PX8 696 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 FNBP1Q96RU3 617 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 CCDC77Q9BR77 488 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 SEPT9Q9UHD8 586 aaPredicted RBP16.4■□□□□ 0.22
USP35-206ENST00000530535 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 PCDHB4Q9Y5E5 795 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
USP35-206ENST00000530535 ASB14A6NK59 587 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 ZSCAN5DPP0CG00 497 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 SKIV2L2P42285 1042 aaKnown RBP16.39■□□□□ 0.21
USP35-206ENST00000530535 RPL7AP62424 266 aaKnown RBP16.39■□□□□ 0.21
USP35-206ENST00000530535 FASTKD3Q14CZ7 662 aaKnown RBP16.39■□□□□ 0.21
USP35-206ENST00000530535 ZNF792Q3KQV3 632 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 SCARA3Q6AZY7 606 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 RBBP8NLQ8NC74 664 aaPredicted RBP16.39■□□□□ 0.21
USP35-206ENST00000530535 GRAMD1AQ96CP6 724 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 SAYSD1Q9NPB0 183 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 TCRBV5S1A1TA0A578 114 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 PI4K2BG5E9Z4 385 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 PRPF4O43172 522 aaKnown RBP eCLIP16.39■□□□□ 0.21
USP35-206ENST00000530535 ETS1P14921 441 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 ZNF132P52740 706 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 MFSD7Q6UXD7 560 aa16.39■□□□□ 0.21
USP35-206ENST00000530535 ALLCQ8N6M5 410 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms