RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-215	ENST00000522275	RNF17	Q9BXT8	1623 aa	Known RBP	4.87	□□□□□ -1.63
PCM1-215	ENST00000522275	TCP11X1	B4DZS4	312 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	DDX3X	O00571	662 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TRAFD1	O14545	582 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FYB1	O15117	783 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RAD51B	O15315	384 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ITM2A	O43736	263 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	USP1	O94782	785 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ATG7	O95352	703 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	BMP10	O95393	424 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FOS	P01100	380 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ITGB3	P05106	788 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FAM228B	P0C875	321 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	UQCRB	P14927	111 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ATP6V1B1	P15313	513 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PSMA4	P25789	261 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PTPN4	P29074	926 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	CDC27	P30260	824 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	LRPAP1	P30533	357 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	KRT2	P35908	639 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PBX1	P40424	430 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	GPD2	P43304	727 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	NR4A2	P43354	598 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ATP6V0D1	P61421	351 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	GRIN1	Q05586	938 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ASPH	Q12797	758 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	CDC20	Q12834	499 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	AIMP1	Q12904	312 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RAPGEF1	Q13905	1077 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PDK3	Q15120	406 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SGCA	Q16586	387 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	VARS2	Q5ST30	1063 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	STOX1	Q6ZVD7	989 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	STK32C	Q86UX6	486 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FAM124A	Q86V42	546 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RASSF3	Q86WH2	238 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ECHDC2	Q86YB7	292 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SLC44A2	Q8IWA5	706 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ANKRD13C	Q8N6S4	541 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RFWD2	Q8NHY2	731 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ZFR	Q96KR1	1074 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	OPALIN	Q96PE5	141 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SLC29A1	Q99808	456 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TRIM55	Q9BYV6	548 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	HOXD1	Q9GZZ0	328 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SMYD3	Q9H7B4	428 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TLE6	Q9H808	572 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	MRM3	Q9HC36	420 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ATP13A2	Q9NQ11	1180 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PAQR5	Q9NXK6	330 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SNTG2	Q9NY99	539 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TNFRSF10D	Q9UBN6	386 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FAM8A1	Q9UBU6	413 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FETUB	Q9UGM5	382 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RSL24D1	Q9UHA3	163 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SMG5	Q9UPR3	1016 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SIK3	Q9Y2K2	1263 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PZP	P20742	1482 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SNAPC4	Q5SXM2	1469 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SHPRH	Q149N8	1683 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ABCC4	O15439	1325 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	C9orf84	Q5VXU9	1444 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	CD109	Q6YHK3	1445 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ARHGEF40	Q8TER5	1519 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	UGGT1	Q9NYU2	1555 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	NUP155	O75694	1391 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	MAGEB16	A2A368	324 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FAM172BP	A6NC97	362 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RNF225	M0QZC1	329 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	APOL1	O14791	398 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	JAK2	O60674	1132 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	NDUFS2	O75306	463 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TOMM70	O94826	608 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SEMA3D	O95025	777 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	POP4	O95707	220 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	GAS8	O95995	478 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	HSMCR30	P0CW71	290 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	MUT	P22033	750 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	JAK1	P23458	1154 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	GSTM2	P28161	218 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RFC1	P35251	1148 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	NUDT1	P36639	197 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ABCG1	P45844	678 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SLC26A2	P50443	739 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ERF	P50548	548 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ALDH18A1	P54886	795 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	SST	P61278	116 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	HERVK_113	P62684	666 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	RPP38	P78345	283 aa	Known RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PRKCQ	Q04759	706 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	FCHO2	Q0JRZ9	810 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	PNOC	Q13519	176 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ANKRD1	Q15327	319 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	MAPK6	Q16659	721 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	TRIM16L	Q309B1	348 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	C6orf118	Q5T5N4	469 aa		4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ZNF658	Q5TYW1	1059 aa	Predicted RBP	4.86	□□□□□ -1.63
PCM1-215	ENST00000522275	ITPRIPL1	Q6GPH6	555 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms