RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 KATNAL1Q9BW62 490 aa27.4■■□□□ 1.98
COL13A1-214ENST00000522165 BARX2Q9UMQ3 279 aaPredicted RBP27.4■■□□□ 1.98
COL13A1-214ENST00000522165 CTGFP29279 349 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 FLT3P36888 993 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 SNX17Q15036 470 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 CCDC105Q8IYK2 499 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 HERPUD2Q9BSE4 406 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 FAM204AQ9H8W3 233 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 TRIP11Q15643 1979 aa27.39■■□□□ 1.98
COL13A1-214ENST00000522165 AXLP30530 894 aa27.39■■□□□ 1.97
COL13A1-214ENST00000522165 YARSP54577 528 aaKnown RBP27.39■■□□□ 1.97
COL13A1-214ENST00000522165 OGDHQ02218 1023 aa27.39■■□□□ 1.97
COL13A1-214ENST00000522165 SGO2Q562F6 1265 aa27.39■■□□□ 1.97
COL13A1-214ENST00000522165 TMEM40Q8WWA1 233 aa27.39■■□□□ 1.97
COL13A1-214ENST00000522165 ZDHHC18Q9NUE0 388 aa27.39■■□□□ 1.97
COL13A1-214ENST00000522165 TRIP12Q14669 1992 aaPredicted RBP27.38■■□□□ 1.97
COL13A1-214ENST00000522165 C17orf102A2RUQ5 167 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 SSR1P43307 286 aaKnown RBP27.38■■□□□ 1.97
COL13A1-214ENST00000522165 SREBF2Q12772 1141 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 ZBTB6Q15916 424 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 TTC39CQ8N584 583 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA6L1Q8N7Z2 621 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 EXD1Q8NHP7 514 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 WDR3Q9UNX4 943 aaKnown RBP eCLIP27.38■■□□□ 1.97
COL13A1-214ENST00000522165 SNX24Q9Y343 169 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 HES2Q9Y543 173 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 PASKQ96RG2 1323 aa27.38■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA8KD6RF30 607 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 MICAL2O94851 1124 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 VDRP11473 427 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 AKR1A1P14550 325 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 HOXC8P31273 242 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 PURAQ00577 322 aaKnown RBP27.37■■□□□ 1.97
COL13A1-214ENST00000522165 MYO1EQ12965 1108 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 ALKAL1Q6UXT8 129 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 CCDC50Q8IVM0 306 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 C1orf54Q8WWF1 131 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 NXF3Q9H4D5 531 aaKnown RBP27.37■■□□□ 1.97
COL13A1-214ENST00000522165 ZKSCAN7Q9P0L1 754 aaPredicted RBP27.37■■□□□ 1.97
COL13A1-214ENST00000522165 HSD17B3P37058 310 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 KCNJ1P48048 391 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 NDST1P52848 882 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 PIGHQ14442 188 aaPredicted RBP27.37■■□□□ 1.97
COL13A1-214ENST00000522165 CNGA2Q16280 664 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 SLCO2A1Q92959 643 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 HEXIM2Q96MH2 286 aaKnown RBP27.37■■□□□ 1.97
COL13A1-214ENST00000522165 PSD3Q9NYI0 1048 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 TJP2Q9UDY2 1190 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 TLL2Q9Y6L7 1015 aa27.37■■□□□ 1.97
COL13A1-214ENST00000522165 F8VP50 259 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 HMGCRP04035 888 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 RALAP11233 206 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 GSCP56915 257 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-214ENST00000522165 KLF1Q13351 362 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-214ENST00000522165 UAP1Q16222 522 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-214ENST00000522165 TMC3Q7Z5M5 1100 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 NIPA2Q8N8Q9 360 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 TRPV1Q8NER1 839 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 CPXM1Q96SM3 734 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 FMO2Q99518 471 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 TRIM6Q9C030 488 aaPredicted RBP27.36■■□□□ 1.97
COL13A1-214ENST00000522165 GRHL1Q9NZI5 618 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 CNTN3Q9P232 1028 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 GJC1P36383 396 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 LRRC38Q5VT99 294 aa27.36■■□□□ 1.97
COL13A1-214ENST00000522165 PIN4Q9Y237 131 aaKnown RBP27.36■■□□□ 1.97
COL13A1-214ENST00000522165 SIGLEC16A6NMB1 481 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 RECQL4O94761 1208 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 TCF4P15884 667 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 RPL21P46778 160 aaKnown RBP27.35■■□□□ 1.97
COL13A1-214ENST00000522165 ZDHHC24Q6UX98 284 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 C7orf31Q8N865 590 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 BEST2Q8NFU1 509 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 OSBPL8Q9BZF1 889 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 CHST7Q9NS84 486 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 TUBGCP4Q9UGJ1 667 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 PTPN22Q9Y2R2 807 aa27.35■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA8SH3BPF8 625 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 M0QYV0 167 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 PPEF2O14830 753 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 DUSP11O75319 330 aaKnown RBP27.34■■□□□ 1.97
COL13A1-214ENST00000522165 ECEL1O95672 775 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GNAT1P11488 350 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GBP1P32455 592 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 CRYBB1P53674 252 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-214ENST00000522165 PSMC1P62191 440 aaKnown RBP27.34■■□□□ 1.97
COL13A1-214ENST00000522165 ZNF771Q7L3S4 317 aaPredicted RBP27.34■■□□□ 1.97
COL13A1-214ENST00000522165 XYLT1Q86Y38 959 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 NME8Q8N427 588 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 HEMGNQ9BXL5 484 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 DCLK3Q9C098 648 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 WDR35Q9P2L0 1181 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 KIAA1257Q9ULG3 409 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 PLAAQ9Y263 795 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA6CA6NDK9 693 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 ERBB2P04626 1255 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GOLGA6DP0CG33 693 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 KRT3P12035 628 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 GPD2P43304 727 aa27.34■■□□□ 1.97
COL13A1-214ENST00000522165 MTMR3Q13615 1198 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms