RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 AMNQ9BXJ7 453 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 NYXQ9GZU5 481 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 HAPLN2Q9GZV7 340 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 PNPLA8Q9NP80 782 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 SLC39A2Q9NP94 309 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 DMRT3Q9NQL9 472 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 POLR3BQ9NW08 1133 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 SAE1Q9UBE0 346 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 SNX13Q9Y5W8 968 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 REV3LO60673 3130 aa5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 USP9XQ93008 2570 aaPredicted RBP5.56□□□□□ -1.52
HMGB1P23-201ENST00000518743 RTL9Q8NET4 1388 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 LTBP2Q14767 1821 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 PFASO15067 1338 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 A0A1W2PPL8 197 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 NCAM1P13591 858 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 ECHS1P30084 290 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 MAP2K6P52564 334 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 RAB1AP62820 205 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 NOMO1Q15155 1222 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 TARBP2Q15633 366 aaKnown RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 ATP2B3Q16720 1220 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 C3orf36Q3SXR2 165 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 PLEKHN1Q494U1 663 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 C19orf54Q5BKX5 351 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZFYVE27Q5T4F4 411 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 ADGRF1Q5T601 910 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 GRAMD4Q6IC98 578 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 CLEC4GQ6UXB4 293 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 RSPH3Q86UC2 560 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 UNC5BQ8IZJ1 945 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 PPP1R14CQ8TAE6 165 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 POF1BQ8WVV4 589 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 EVI5LQ96CN4 794 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 RIPOR3Q96MK2 946 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 COLEC11Q9BWP8 271 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 WDCPQ9H6R7 721 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 RSAD1Q9HA92 442 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 SARS2Q9NP81 518 aaKnown RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 ASH1LQ9NR48 2969 aaKnown RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 LMBRD1Q9NUN5 540 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 FEZ2Q9UHY8 353 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 OGDHLQ9ULD0 1010 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 GABRQQ9UN88 632 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 BRWD1Q9NSI6 2320 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 PLXNA1Q9UIW2 1896 aa5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRRC2BQ5JSZ5 2229 aaKnown RBP5.55□□□□□ -1.52
HMGB1P23-201ENST00000518743 DAPK3O43293 454 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 AKR1B10O60218 316 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 A1BGP04217 495 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 LTA4HP09960 611 aaKnown RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 HSD3B1P14060 373 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 GRK6P43250 576 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 PIP4K2AP48426 406 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 CASP5P51878 434 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 MGAT5Q09328 741 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 AMOTQ4VCS5 1084 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 CD300LDQ6UXZ3 194 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZNF574Q6ZN55 896 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 GAREM2Q75VX8 874 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 IRF2BP1Q8IU81 584 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 APOBEC3FQ8IUX4 373 aaKnown RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 RHOT1Q8IXI2 618 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 TEX19Q8NA77 164 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 RIN2Q8WYP3 895 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 ARL8AQ96BM9 186 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 INTS4Q96HW7 963 aaKnown RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 CLIC6Q96NY7 704 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRRX2Q99811 253 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 ISCA1Q9BUE6 129 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 WDR12Q9GZL7 423 aaKnown RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 VPS11Q9H270 941 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 CERS4Q9HA82 394 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 ZNF287Q9HBT7 754 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 RXFP1Q9HBX9 757 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 CD320Q9NPF0 282 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 LUZP4Q9P127 313 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 VWA7Q9Y334 891 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 MORC2Q9Y6X9 1032 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 SCN9AQ15858 1988 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 DNAH12Q6ZR08 3092 aa5.54□□□□□ -1.52
HMGB1P23-201ENST00000518743 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 H3BUI4 141 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 SASH1O94885 1247 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 GASTP01350 101 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 CELA3BP08861 270 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 CYP2C8P10632 490 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 TNFSF4P23510 183 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 SMARCA1P28370 1054 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PRIM2P49643 509 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 FLT3LGP49771 235 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 GALK1P51570 392 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 PER3P56645 1201 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 WNT3AP56704 352 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 YBX1P67809 324 aaKnown RBP5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 DSC2Q02487 901 aa5.53□□□□□ -1.52
HMGB1P23-201ENST00000518743 ICA1Q05084 483 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms