RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SLC20A1Q8WUM9 679 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 TRAPPC12Q8WVT3 735 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 GRAMD1AQ96CP6 724 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 SELENOSQ9BQE4 189 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 ZSWIM1Q9BR11 485 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 TRIM51Q9BSJ1 452 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 PTPRHQ9HD43 1115 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.4■□□□□ 0.71e-28■□□□□ 8.9
SDC2-202ENST00000518385 GRHL1Q9NZI5 618 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 WHRNQ9P202 907 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 CPSF3Q9UKF6 684 aaKnown RBP19.4■□□□□ 0.7
SDC2-202ENST00000518385 PCDHB2Q9Y5E7 798 aa19.4■□□□□ 0.7
SDC2-202ENST00000518385 ABLIM1O14639 778 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 RASGRF2O14827 1237 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 TCEA3O75764 348 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 SUN1O94901 812 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 EDN1P05305 212 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 ELNP15502 786 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 GJA9P57773 515 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 CDC42EP1Q00587 391 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 ATF7IP2Q5U623 682 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 DCAF12L1Q5VU92 463 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 TLDC1Q6P9B6 456 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 PXYLP1Q8TE99 480 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 ART4Q93070 314 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 IMPG2Q9BZV3 1241 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 ADAM7Q9H2U9 754 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 NOD2Q9HC29 1040 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 CNTN6Q9UQ52 1028 aa19.39■□□□□ 0.69
SDC2-202ENST00000518385 IL18RAPO95256 599 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 VNN1O95497 513 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 F2P00734 622 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 OAS1P00973 400 aaKnown RBP19.38■□□□□ 0.69
SDC2-202ENST00000518385 PLTPP55058 493 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 NKX3-2P78367 333 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 FMO1Q01740 532 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 MBTD1Q05BQ5 628 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 PPP1R7Q15435 360 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 FSCN1Q16658 493 aaKnown RBP19.38■□□□□ 0.69
SDC2-202ENST00000518385 DUOXA2Q1HG44 320 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 SLC47A2Q86VL8 602 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 FAM228AQ86W67 206 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 RAET1EQ8TD07 263 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 N4BP2L2Q92802 583 aaPredicted RBP19.38■□□□□ 0.69
SDC2-202ENST00000518385 RNF25Q96BH1 459 aaPredicted RBP19.38■□□□□ 0.69
SDC2-202ENST00000518385 FAXDC2Q96IV6 333 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 UPF3AQ9H1J1 476 aaKnown RBP19.38■□□□□ 0.69
SDC2-202ENST00000518385 GOLPH3Q9H4A6 298 aa19.38■□□□□ 0.69
SDC2-202ENST00000518385 RRN3P2A6NIE6 340 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 RIPK2O43353 540 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 WFS1O76024 890 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 HMGCRP04035 888 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 PRMT2P55345 433 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 BEX3Q00994 111 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 CUL2Q13617 745 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 TRIM72Q6ZMU5 477 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 CEP57Q86XR8 500 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 DDX1Q92499 740 aaKnown RBP19.37■□□□□ 0.69
SDC2-202ENST00000518385 MIEF2Q96C03 454 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 TRIM11Q96F44 468 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 SCLT1Q96NL6 688 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 THAP2Q9H0W7 228 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 UVRAGQ9P2Y5 699 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 USP15Q9Y4E8 981 aaPredicted RBP19.37■□□□□ 0.69
SDC2-202ENST00000518385 ALG6Q9Y672 507 aa19.37■□□□□ 0.69
SDC2-202ENST00000518385 INO80B-WBP1J3KQ70 363 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 HAS3O00219 553 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 SNX3O60493 162 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 B4GALT4O60513 344 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 KPNA6O60684 536 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CLTAP09496 248 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CHRM1P11229 460 aaPredicted RBP19.36■□□□□ 0.69
SDC2-202ENST00000518385 KRT5P13647 590 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 PRKAR2AP13861 404 aaKnown RBP19.36■□□□□ 0.69
SDC2-202ENST00000518385 ABCB4P21439 1286 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CCND1P24385 295 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 IGBP1P78318 339 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CCDC15Q0P6D6 951 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CALCOCO2Q13137 446 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 NCOA4Q13772 614 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 SLC29A2Q14542 456 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CNGA2Q16280 664 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 MAP3K21Q5TCX8 1036 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 ACAD10Q6JQN1 1059 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 HIBCHQ6NVY1 386 aaPredicted RBP19.36■□□□□ 0.69
SDC2-202ENST00000518385 LRRC34Q8IZ02 419 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CFAP61Q8NHU2 1237 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 FBXO25Q8TCJ0 367 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 NLRP4Q96MN2 994 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 PCDHB18PQ96TA0 734 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 FOXP3Q9BZS1 431 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 INO80BQ9C086 356 aaPredicted RBP19.36■□□□□ 0.69
SDC2-202ENST00000518385 OSGEPQ9NPF4 335 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 TAS2R14Q9NYV8 317 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 GTF3C4Q9UKN8 822 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 SUFUQ9UMX1 484 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 ACTL7BQ9Y614 415 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 DCDC2CA8MYV0 355 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 ATP5HO75947 161 aa19.36■□□□□ 0.69
SDC2-202ENST00000518385 CYP1A2P05177 515 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms