RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 NELL1Q92832 810 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 SAAL1Q96ER3 474 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 TASP1Q9H6P5 420 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 PRMT8Q9NR22 394 aaPredicted RBP21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 ITGA11Q9UKX5 1188 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 NDRG2Q9UN36 371 aaKnown RBP21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 PCDHB5Q9Y5E4 795 aa21.51■■□□□ 1.03
UBE2D3-220ENST00000505307 SPTBN4Q9H254 2564 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 COL4A3Q01955 1670 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 A0A087X0B3 334 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 SPTLC2O15270 562 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 HUS1O60921 280 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 SOAT2O75908 522 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 POLR2BP30876 1174 aaKnown RBP21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 ARHGAP29Q52LW3 1261 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 LRRTM3Q86VH5 581 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 PDILTQ8N807 584 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 C1orf127Q8N9H9 656 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 ZBTB44Q8NCP5 570 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 MKNK1Q9BUB5 465 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 AGAP1Q9UPQ3 857 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 TSC2P49815 1807 aa21.5■■□□□ 1.03
UBE2D3-220ENST00000505307 SOBPA7XYQ1 873 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 ITGB3P05106 788 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 ATF6P18850 670 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 NRLP54845 237 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 RBP5P82980 135 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 PLCB2Q00722 1185 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 MTAPQ13126 283 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 SURF1Q15526 300 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 STXBP5Q5T5C0 1151 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 GPD1LQ8N335 351 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 CSGALNACT2Q8N6G5 542 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 SUMF1Q8NBK3 374 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 LEO1Q8WVC0 666 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 RSPRY1Q96DX4 576 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 LPIN3Q9BQK8 851 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 ACBD6Q9BR61 282 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 CBWD1Q9BRT8 395 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 LMAN1LQ9HAT1 526 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 FOXD4L1Q9NU39 408 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 KBTBD4Q9NVX7 518 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 GDAP2Q9NXN4 497 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 ABI2Q9NYB9 513 aaPredicted RBP21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 R3HCC1Q9Y3T6 440 aaKnown RBP21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 PATJQ8NI35 1801 aa21.49■■□□□ 1.03
UBE2D3-220ENST00000505307 PRPF6O94906 941 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 YEATS4O95619 227 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 ID4P47928 161 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 KPNA1P52294 538 aaPredicted RBP21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 MYL7Q01449 175 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 PDCL2Q8N4E4 241 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 IQUBQ8NA54 791 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 HINFPQ9BQA5 517 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 IL21Q9HBE4 155 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 KIAA1586Q9HCI6 787 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 ABCB6Q9NP58 842 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 THG1LQ9NWX6 298 aaKnown RBP21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 NCANO14594 1321 aa21.48■■□□□ 1.03
UBE2D3-220ENST00000505307 ZNF292O60281 2723 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 TULP1O00294 542 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 TMEM191BP0C7N4 346 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 CCNE1P24864 410 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 DDX6P26196 483 aaKnown RBP eCLIP21.47■■□□□ 1.033e-8■□□□□ 10.6
UBE2D3-220ENST00000505307 LHX1P48742 406 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 CCR3P51677 355 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 WNT7BP56706 349 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 LRRC32Q14392 662 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 CNNM4Q6P4Q7 775 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 ERMP1Q7Z2K6 904 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 RALGPS2Q86X27 583 aaPredicted RBP21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 TOP6BLQ8N6T0 577 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 ZSWIM2Q8NEG5 633 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 BPIFB1Q8TDL5 484 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 SNX21Q969T3 373 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 ANKRD36BP1Q96IX9 119 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 FGFBP2Q9BYJ0 223 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 TRIM9Q9C026 710 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 L1RE1Q9UN81 338 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 OTOGLQ3ZCN5 2332 aa21.47■■□□□ 1.03
UBE2D3-220ENST00000505307 COL4A2P08572 1712 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 MYBPHLA2RUH7 354 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 GOLGA8IPA6NC78 632 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 ZNF233A6NK53 670 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 GOLGA8JA6NMD2 632 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 EIF3DO15371 548 aaKnown RBP eCLIP21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CUTAO60888 179 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 LILRB5O75023 590 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CSH1P0DML2 217 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CSH2P0DML3 217 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CHRNB1P11230 501 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 PCSK1P29120 753 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 RPL10AP62906 217 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 BFSP1Q12934 665 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 MYO1EQ12965 1108 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 E2F4Q16254 413 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 DPH6Q7L8W6 267 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CELF5Q8N6W0 485 aaKnown RBP21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 CXorf38Q8TB03 319 aa21.46■■□□□ 1.03
UBE2D3-220ENST00000505307 GIPC2Q8TF65 315 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms