RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 PPP4R2Q9NY27 417 aa13.35□□□□□ -0.27
SAMM50-205ENST00000493621 CPSF3Q9UKF6 684 aaKnown RBP13.35□□□□□ -0.27
SAMM50-205ENST00000493621 CNOT1A5YKK6 2376 aaKnown RBP13.34□□□□□ -0.27
SAMM50-205ENST00000493621 ANO9A1A5B4 782 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 PIRO00625 290 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 FOXD2O60548 495 aaPredicted RBP13.34□□□□□ -0.27
SAMM50-205ENST00000493621 ACOT2P49753 483 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 PTPAQ15257 358 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 SF3A2Q15428 464 aaKnown RBP13.34□□□□□ -0.27
SAMM50-205ENST00000493621 AASDHQ4L235 1098 aaPredicted RBP13.34□□□□□ -0.27
SAMM50-205ENST00000493621 IL31Q6EBC2 164 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 SLC39A4Q6P5W5 647 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 METTL23Q86XA0 190 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 CHAMP1Q96JM3 812 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 KIF2CQ99661 725 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 PYM1Q9BRP8 204 aaKnown RBP13.34□□□□□ -0.27
SAMM50-205ENST00000493621 SLC46A2Q9BY10 475 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 ARRDC1-AS1Q9H2J1 176 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 PARVGQ9HBI0 331 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 DSEQ9UL01 958 aa13.34□□□□□ -0.27
SAMM50-205ENST00000493621 CYB561D2O14569 222 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 TRAK2O60296 914 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 RPP40O75818 363 aaKnown RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 KRT18P05783 430 aaKnown RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 SCP2P22307 547 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 ZNF131P52739 623 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 FSTL4Q6MZW2 842 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 LRRTM3Q86VH5 581 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 CMTM8Q8IZV2 173 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 THEM5Q8N1Q8 247 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 C12orf50Q8NA57 414 aaPredicted RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 LRRC15Q8TF66 581 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 GAB3Q8WWW8 586 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 DDX1Q92499 740 aaKnown RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 CALML4Q96GE6 196 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 HPS4Q9NQG7 708 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 ABI2Q9NYB9 513 aaPredicted RBP13.33□□□□□ -0.28
SAMM50-205ENST00000493621 CCL26Q9Y258 94 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 DERAQ9Y315 318 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 USP24Q9UPU5 2620 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 MYO16Q9Y6X6 1858 aa13.33□□□□□ -0.28
SAMM50-205ENST00000493621 TISP43B9A030 160 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 ANKRD63C9JTQ0 380 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 CCDC192P0DO97 292 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
SAMM50-205ENST00000493621 NMT1P30419 496 aaKnown RBP13.32□□□□□ -0.28
SAMM50-205ENST00000493621 AVPR1AP37288 418 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 TAF6P49848 677 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
SAMM50-205ENST00000493621 RUNX3Q13761 415 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 MCM6Q14566 821 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 TMEM196Q5HYL7 178 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 WSCD1Q658N2 575 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 ADALQ6DHV7 355 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 CACNA2D4Q7Z3S7 1137 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 KBTBD6Q86V97 674 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 MAB21L3Q8N8X9 362 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 SPPL2BQ8TCT7 592 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 C2orf15Q8WU43 125 aaKnown RBP13.32□□□□□ -0.28
SAMM50-205ENST00000493621 AK8Q96MA6 479 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 FAM83CQ9BQN1 747 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 EBF3Q9H4W6 596 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 ASB7Q9H672 318 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 BLOC1S4Q9NUP1 217 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 DPP3Q9NY33 737 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 SLC8A2Q9UPR5 921 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
SAMM50-205ENST00000493621 OTOL1A6NHN0 477 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 H3BQV1 296 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 SLC26A4O43511 780 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 ATG13O75143 517 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 TBCAO75347 108 aaKnown RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 EPN2O95208 641 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 EGFP01133 1207 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 F11P03951 625 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 UBA7P41226 1012 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 RAP1GAPP47736 663 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 NLRP12P59046 1061 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 GTF2BQ00403 316 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 SMARCB1Q12824 385 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 BFSP1Q12934 665 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 ZC2HC1CQ53FD0 456 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 DCP1BQ8IZD4 617 aaKnown RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 STKLD1Q8NE28 680 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 USP13Q92995 863 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 CHFRQ96EP1 664 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 LOXL4Q96JB6 756 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 FIZ1Q96SL8 496 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 TMLHEQ9NVH6 421 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 POLR3BQ9NW08 1133 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 ZMYM5Q9UJ78 669 aa13.31□□□□□ -0.28
SAMM50-205ENST00000493621 AGO2Q9UKV8 859 aaKnown RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 MAGED2Q9UNF1 606 aaPredicted RBP13.31□□□□□ -0.28
SAMM50-205ENST00000493621 C2CD2Q9Y426 696 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms