RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 MED15Q96RN5 788 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 SPATA5L1Q9BVQ7 753 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 BRIP1Q9BX63 1249 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 ALOXE3Q9BYJ1 711 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 VPS11Q9H270 941 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 SMOC2Q9H3U7 446 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 ARFGAP3Q9NP61 516 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 AKIP1Q9NQ31 210 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 SERHLQ9NQF3 203 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 STARD7Q9NQZ5 370 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 HESX1Q9UBX0 185 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 RAPGEFL1Q9UHV5 662 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 TAGLN3Q9UI15 199 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 CNOT11Q9UKZ1 510 aaKnown RBP4.8□□□□□ -1.64
CLK1-213ENST00000492793 TBC1D30Q9Y2I9 924 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 PAXBP1Q9Y5B6 917 aa4.8□□□□□ -1.64
CLK1-213ENST00000492793 A0A087WWL8 130 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 UNC119BA6NIH7 251 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 THAP12O43422 761 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 ATXN1LP0C7T5 689 aaKnown RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 SETSIPP0DME0 302 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 ABCB4P21439 1286 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 KLRC1P26715 233 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 GCLCP48506 637 aaPredicted RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 PXNP49023 591 aaPredicted RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 ITGA8P53708 1063 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 LILRA4P59901 499 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 FAM189BP81408 668 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 MC2RQ01718 297 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 BTKQ06187 659 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 TOB2Q14106 344 aaPredicted RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 YAF2Q8IY57 180 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SPICE1Q8N0Z3 855 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SYNE4Q8N205 404 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 CPEB3Q8NE35 698 aaKnown RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 OR56A3Q8NH54 315 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SNX19Q92543 992 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 LRRC46Q96FV0 321 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SGCZQ96LD1 299 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SLC46A2Q9BY10 475 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 DPH1Q9BZG8 443 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 PLCB1Q9NQ66 1216 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 ETAA1Q9NY74 926 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 ZNF212Q9UDV6 495 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 SHOC2Q9UQ13 582 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 LRCH1Q9Y2L9 728 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 REXO2Q9Y3B8 237 aaKnown RBP4.79□□□□□ -1.64
CLK1-213ENST00000492793 NEU2Q9Y3R4 380 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 CHST2Q9Y4C5 530 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 PCDHGB2Q9Y5G2 931 aa4.79□□□□□ -1.64
CLK1-213ENST00000492793 MBD3L4A6NDZ8 208 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 MBD3L3A6NE82 208 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 GRXCR1A8MXD5 290 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 RAB27BO00194 218 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MT-ND5P03915 603 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CFIP05156 583 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 ELANEP08246 267 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CYP2C9P11712 490 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 ZNF20P17024 532 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 LAG3P18627 525 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 FDXRP22570 491 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 TM4SF4P48230 202 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 NDUFV1P49821 464 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 PRKAG1P54619 331 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CXADRP78310 365 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CHAF1AQ13111 956 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 STK3Q13188 491 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 PMS2P11Q13670 270 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 BOP1Q14137 746 aaKnown RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 MORC3Q14149 939 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 GEN1Q17RS7 908 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 ARL13BQ3SXY8 428 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MGAT5BQ3V5L5 792 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 TIGD2Q4W5G0 525 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 PLA1AQ53H76 456 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CACHD1Q5VU97 1274 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 HIBCHQ6NVY1 386 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 TMEM108Q6UXF1 575 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 PPP1R32Q7Z5V6 425 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MICU3Q86XE3 530 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MYLK4Q86YV6 388 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 COLGALT2Q8IYK4 626 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 ATP11CQ8NB49 1132 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 CCDC150Q8NCX0 1101 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 DEPTORQ8TB45 409 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MORC4Q8TE76 937 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 SMCR8Q8TEV9 937 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 ZNF483Q8TF39 744 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
CLK1-213ENST00000492793 ZNF566Q969W8 418 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 KIAA1191Q96A73 305 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 LRIG1Q96JA1 1093 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 MSLNLQ96KJ4 702 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 PPP1R9BQ96SB3 815 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 HEPHQ9BQS7 1158 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 GJB4Q9NTQ9 266 aa4.78□□□□□ -1.64
CLK1-213ENST00000492793 GPRC5BQ9NZH0 403 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms