RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 TAS1R2Q8TE23 839 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 ZNF707Q96C28 371 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 FUBP3Q96I24 572 aaKnown RBP eCLIP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 MED15Q96RN5 788 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 PHF7Q9BWX1 381 aaPredicted RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 BCO2Q9BYV7 579 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 NIF3L1Q9GZT8 377 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 RAB20Q9NX57 234 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 DDX43Q9NXZ2 648 aaKnown RBP11.86□□□□□ -0.51
CPSF7-212ENST00000489728 TMEM63CQ9P1W3 806 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 INSL5Q9Y5Q6 135 aa11.86□□□□□ -0.51
CPSF7-212ENST00000489728 MTMR11A4FU01 709 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 LRG1P02750 347 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 FMO5P49326 533 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 TUFMP49411 452 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 ARPP19P56211 112 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 CFAP221Q4G0U5 840 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 SCARA3Q6AZY7 606 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 TMC5Q6UXY8 1006 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 SPATA31D4Q6ZUB0 917 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 UNC93AQ86WB7 457 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 LEMD2Q8NC56 503 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 SMG7Q92540 1137 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 CNOT6LQ96LI5 555 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 CEP295NLQ96MC4 621 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 PKMYT1Q99640 499 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 SNX25Q9H3E2 840 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 CYP4F11Q9HBI6 524 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 AVENQ9NQS1 362 aaPredicted RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 USTQ9Y2C2 406 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 PCDHB5Q9Y5E4 795 aa11.85□□□□□ -0.51
CPSF7-212ENST00000489728 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
CPSF7-212ENST00000489728 RFPL2O75678 378 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 IL9P15248 144 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 GNL1P36915 607 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 MAGEA11P43364 429 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 ASPAP45381 313 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 ZP2Q05996 745 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 INCA1Q0VD86 236 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 CBWD6Q4V339 395 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 SLC39A12Q504Y0 691 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 CBWD3Q5JTY5 395 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 CBWD5Q5RIA9 395 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 CAVIN1Q6NZI2 390 aaKnown RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 FAM171BQ6P995 826 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 C4orf50Q6ZRC1 276 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 OSTM1Q86WC4 334 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 ELMOD1Q8N336 334 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 C12orf76Q8N812 135 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 ADAMTS19Q8TE59 1207 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 TNIP3Q96KP6 325 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 SYT15Q9BQS2 421 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 MMRN2Q9H8L6 949 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 PIDD1Q9HB75 910 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 WDR6Q9NNW5 1121 aaKnown RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
CPSF7-212ENST00000489728 NR2E1Q9Y466 385 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 YIPF1Q9Y548 306 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 ASB3Q9Y575 518 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 C2orf16Q68DN1 1984 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 CLUHO75153 1309 aa11.84□□□□□ -0.51
CPSF7-212ENST00000489728 GTPBP10A4D1E9 387 aaKnown RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 MICAL2O94851 1124 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 CLSTN1O94985 981 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 SEC24AO95486 1093 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 VNN2O95498 520 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 FGF19O95750 216 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 OR4Q2P0C623 313 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 TBXAS1P24557 533 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 ALDH1A3P47895 512 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 YWHAEP62258 255 aaKnown RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 TYRO3Q06418 890 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 KCNH2Q12809 1159 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 VSTM1Q6UX27 236 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 IRF2BP1Q8IU81 584 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 OR6B3Q8NGW1 331 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 MYCBPAPQ8TBZ2 947 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 TMEM209Q96SK2 561 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 MRPL45Q9BRJ2 306 aaKnown RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 POMKQ9H5K3 350 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 SMYD3Q9H7B4 428 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.83□□□□□ -0.522e-8■■■□□ 14.6
CPSF7-212ENST00000489728 POLIQ9UNA4 740 aa11.83□□□□□ -0.52
CPSF7-212ENST00000489728 ZFP37Q9Y6Q3 630 aaPredicted RBP11.83□□□□□ -0.52
CPSF7-212ENST00000489728 SPTBN5Q9NRC6 3674 aaKnown RBP11.82□□□□□ -0.52
CPSF7-212ENST00000489728 A8MXQ7 604 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 LOC730098B7Z3J9 87 aa11.82□□□□□ -0.52
CPSF7-212ENST00000489728 HAPLN1P10915 354 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms