RNA–Protein interactions for RNA: ENST00000489712.6

NF1-213, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-213ENST00000489712 POU2F2P09086 479 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 ELFN1P0C7U0 828 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 EBLN1P0CF75 366 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 DRD4P21917 467 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 AKAP5P24588 427 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 GCLCP48506 637 aaPredicted RBP4.29□□□□□ -1.72
NF1-213ENST00000489712 KRTAP1-1Q07627 177 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 FCRLBQ6BAA4 426 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 USP37Q86T82 979 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 PPP1R3BQ86XI6 285 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 SRRM1Q8IYB3 904 aaKnown RBP4.29□□□□□ -1.72
NF1-213ENST00000489712 SH2D3CQ8N5H7 860 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 CAMKK1Q8N5S9 505 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 HASPINQ8TF76 798 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 ATRIPQ8WXE1 791 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 MTFMTQ96DP5 389 aaKnown RBP4.29□□□□□ -1.72
NF1-213ENST00000489712 MVB12AQ96EY5 273 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 MRPS18AQ9NVS2 196 aaKnown RBP4.29□□□□□ -1.72
NF1-213ENST00000489712 ST3GAL5Q9UNP4 418 aa4.29□□□□□ -1.72
NF1-213ENST00000489712 ARHGEF17Q96PE2 2063 aaPredicted RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 AHSGP02765 367 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 NR2F6P10588 404 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 PIM1P11309 404 aaPredicted RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 ZFXP17010 805 aaPredicted RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 ITPKBP27987 946 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 EXOSC10Q01780 885 aaKnown RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 ZNF618Q5T7W0 954 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 FAM160B1Q5W0V3 765 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 ZNF551Q7Z340 670 aaPredicted RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 RASAL3Q86YV0 1011 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 FAM109AQ8N4B1 249 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 FAM46DQ8NEK8 389 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 KLHDC4Q8TBB5 520 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 RFKQ969G6 155 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 SLC35A4Q96G79 324 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 CDK5RAP3Q96JB5 506 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 MAP3K14Q99558 947 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 AMBRA1Q9C0C7 1298 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 PNPOQ9NVS9 261 aa4.28□□□□□ -1.72
NF1-213ENST00000489712 NOP58Q9Y2X3 529 aaKnown RBP4.28□□□□□ -1.72
NF1-213ENST00000489712 MANSC4A6NHS7 340 aaPredicted RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 H3BUI4 141 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 CT47B1P0C2W7 299 aaPredicted RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 TOB1P50616 345 aaPredicted RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 CCT8P50990 548 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 EXOSC9Q06265 439 aaKnown RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 FOXF2Q12947 444 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 EIF2B5Q13144 721 aaKnown RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 BMPR2Q13873 1038 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 TBCCQ15814 346 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 EMC10Q5UCC4 262 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 VPS53Q5VIR6 699 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 SUMO4Q6EEV6 95 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 PCSK9Q8NBP7 692 aaKnown RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 PUS7Q96PZ0 661 aaKnown RBP4.27□□□□□ -1.73
NF1-213ENST00000489712 TTYH3Q9C0H2 523 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 TCF7L1Q9HCS4 588 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 AASDHPPTQ9NRN7 309 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 PCDHA1Q9Y5I3 950 aa4.27□□□□□ -1.73
NF1-213ENST00000489712 ANKRD62A6NC57 917 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 WIPF3A6NGB9 483 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 INO80B-WBP1J3KQ70 363 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 ATXN1LP0C7T5 689 aaKnown RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 PF4V1P10720 104 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 NDUFB7P17568 137 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 PCSK6P29122 969 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 SOX8P57073 446 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 LOXL3P58215 753 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 NKX6-1P78426 367 aaPredicted RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 SLC10A2Q12908 348 aaPredicted RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 LAYNQ6UX15 382 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 TMEM108Q6UXF1 575 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 ZNF804AQ7Z570 1209 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 GPATCH3Q96I76 525 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 SLC46A1Q96NT5 459 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 NELL2Q99435 816 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 INO80BQ9C086 356 aaPredicted RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 SARS2Q9NP81 518 aaKnown RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 ARHGEF3Q9NR81 526 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 TYW1Q9NV66 732 aaKnown RBP4.26□□□□□ -1.73
NF1-213ENST00000489712 IP6K2Q9UHH9 426 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 ADAM21Q9UKJ8 722 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 PADI4Q9UM07 663 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 ANKRD6Q9Y2G4 727 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 STXBP5LQ9Y2K9 1186 aa4.26□□□□□ -1.73
NF1-213ENST00000489712 LINC01548A6NM66 108 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 TLR5O60602 858 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 OFD1O75665 1012 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 UNC5CO95185 931 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 PRKCGP05129 697 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 PPIFP30405 207 aaKnown RBP4.25□□□□□ -1.73
NF1-213ENST00000489712 ZNF134P52741 427 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 SRSF4Q08170 494 aaKnown RBP4.25□□□□□ -1.73
NF1-213ENST00000489712 PLS1Q14651 629 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 LONRF3Q496Y0 759 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 IFIT1BQ5T764 474 aaKnown RBP4.25□□□□□ -1.73
NF1-213ENST00000489712 LRCH2Q5VUJ6 765 aa4.25□□□□□ -1.73
NF1-213ENST00000489712 KIAA1614Q5VZ46 1190 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 265.1 ms