RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 CMTM8Q8IZV2 173 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 STKLD1Q8NE28 680 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 HSD17B14Q9BPX1 270 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
U2AF1-211ENST00000486519 ZDHHC4Q9NPG8 344 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 ANKEF1Q9NU02 776 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 DNAAF2Q9NVR5 837 aaKnown RBP16.63■□□□□ 0.25
U2AF1-211ENST00000486519 PCDHB8Q9UN66 801 aa16.63■□□□□ 0.25
U2AF1-211ENST00000486519 LYPLA2O95372 231 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 MESP2Q0VG99 397 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 DCAF4L1Q3SXM0 396 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 MAB21L3Q8N8X9 362 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 ESYT1Q9BSJ8 1104 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 CDT1Q9H211 546 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 PRORYQ9H606 182 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 ECT2Q9H8V3 914 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 POLMQ9NP87 494 aaPredicted RBP16.62■□□□□ 0.25
U2AF1-211ENST00000486519 TOR4AQ9NXH8 423 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 TUBGCP4Q9UGJ1 667 aa16.62■□□□□ 0.25
U2AF1-211ENST00000486519 COL5A1P20908 1838 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-211ENST00000486519 FAM149AA5PLN7 773 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 TRABD2BA6NFA1 517 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 ARHGAP6O43182 974 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 MAP3K13O43283 966 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 LARGE1O95461 756 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 SERPINF2P08697 491 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 AKAP17AQ02040 695 aaKnown RBP16.61■□□□□ 0.25
U2AF1-211ENST00000486519 GFPT1Q06210 699 aaPredicted RBP16.61■□□□□ 0.25
U2AF1-211ENST00000486519 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 NBR1Q14596 966 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 CRY1Q16526 586 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 DUOXA1Q1HG43 343 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 ATF7IP2Q5U623 682 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 NAXDQ8IW45 347 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 GIPC2Q8TF65 315 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 BRF1Q92994 677 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 WNT6Q9Y6F9 365 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 PTPRQQ9UMZ3 2332 aa16.61■□□□□ 0.25
U2AF1-211ENST00000486519 ANAPC1Q9H1A4 1944 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
U2AF1-211ENST00000486519 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 ATMQ13315 3056 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 CCDC196A0A1B0GTZ2 297 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 FAM205CA6NFA0 338 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 ARHGAP33O14559 1287 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 CBFA2T3O75081 653 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 OAZ2O95190 189 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 GRM5P41594 1212 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 ABCG1P45844 678 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 YWHAHQ04917 246 aaPredicted RBP16.6■□□□□ 0.25
U2AF1-211ENST00000486519 GPR17Q13304 367 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 GAB4Q2WGN9 574 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 EARS2Q5JPH6 523 aaKnown RBP16.6■□□□□ 0.25
U2AF1-211ENST00000486519 TXNDC8Q6A555 127 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 TMPRSS7Q7RTY8 843 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 SCUBE3Q8IX30 993 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 APPL2Q8NEU8 664 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 C22orf23Q9BZE7 217 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 KCNJ14Q9UNX9 436 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 ASB3Q9Y575 518 aa16.6■□□□□ 0.25
U2AF1-211ENST00000486519 CCNT1O60563 726 aaKnown RBP16.59■□□□□ 0.25
U2AF1-211ENST00000486519 KCNE1P15382 129 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 IFNAR1P17181 557 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 OPRD1P41143 372 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 CCT2P78371 535 aaKnown RBP16.59■□□□□ 0.25
U2AF1-211ENST00000486519 Q6ZUG5 572 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 TTC16Q8NEE8 873 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 TDP1Q9NUW8 608 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
U2AF1-211ENST00000486519 M0QZQ0 153 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SGK1O00141 431 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 DTNBO60941 627 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 RPL9P32969 192 aaKnown RBP16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SPAG1Q07617 926 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 BFSP1Q12934 665 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 HNRNPDQ14103 355 aaKnown RBP16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SEZ6Q53EL9 994 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 PPP4R3AQ6IN85 833 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 NEK8Q86SG6 692 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SLC41A1Q8IVJ1 513 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 ALLCQ8N6M5 410 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 HMGB4Q8WW32 186 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SEPT5Q99719 369 aaPredicted RBP16.58■□□□□ 0.24
U2AF1-211ENST00000486519 C2orf40Q9H1Z8 148 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 SLC38A7Q9NVC3 462 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 CNTN3Q9P232 1028 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 MGAQ8IWI9 3026 aa16.58■□□□□ 0.24
U2AF1-211ENST00000486519 MARCH6O60337 910 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 F11P03951 625 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 MARCKSP29966 332 aaPredicted RBP16.57■□□□□ 0.24
U2AF1-211ENST00000486519 CDC25CP30307 473 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 MTF1Q14872 753 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 PDGFRLQ15198 375 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 EML3Q32P44 896 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 EMC10Q5UCC4 262 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 CPA6Q8N4T0 437 aa16.57■□□□□ 0.24
U2AF1-211ENST00000486519 TXNDC5Q8NBS9 432 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms