RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 SMARCAL1Q9NZC9 954 aa11.4□□□□□ -0.58
PATJ-207ENST00000484562 DBR1Q9UK59 544 aaKnown RBP11.4□□□□□ -0.58
PATJ-207ENST00000484562 KDM6AO15550 1401 aaPredicted RBP11.4□□□□□ -0.58
PATJ-207ENST00000484562 PHF20L1A8MW92 1017 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 KIF28PB7ZC32 967 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 NFIBO00712 420 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 PGK2P07205 417 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 SLC2A3P11169 496 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 LSP1P33241 339 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 PTGER2P43116 358 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 FNTAP49354 379 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 CACHD1Q5VU97 1274 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 IYDQ6PHW0 289 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 HDDC2Q7Z4H3 204 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 OOSP2Q86WS3 158 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 SUGP1Q8IWZ8 645 aaKnown RBP11.4□□□□□ -0.59
PATJ-207ENST00000484562 SLC30A5Q8TAD4 765 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 MRPL48Q96GC5 212 aaKnown RBP11.4□□□□□ -0.59
PATJ-207ENST00000484562 ECSITQ9BQ95 431 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 YIPF2Q9BWQ6 316 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 PRMT7Q9NVM4 692 aaPredicted RBP11.4□□□□□ -0.59
PATJ-207ENST00000484562 IMPAD1Q9NX62 359 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 MARCOQ9UEW3 520 aaPredicted RBP11.4□□□□□ -0.59
PATJ-207ENST00000484562 SH3BP1Q9Y3L3 701 aa11.4□□□□□ -0.59
PATJ-207ENST00000484562 F8W810 466 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 AKR1B1P15121 316 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 MUTP22033 750 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 STIP1P31948 543 aaKnown RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 RGS7P49802 495 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SBK1Q52WX2 424 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 BOLA3Q53S33 107 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 TTC33Q6PID6 262 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 REEP2Q9BRK0 252 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 GPR63Q9BZJ6 419 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 EPS8L2Q9H6S3 715 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 USE1Q9NZ43 259 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 IL1RAPL1Q9NZN1 696 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 NYAP2Q9P242 653 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 IQCA1LA6NCM1 817 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 RHOBTB1O94844 696 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SOAT1P35610 550 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 PLOD1Q02809 727 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 ZNF543Q08ER8 600 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 KPNB1Q14974 876 aaKnown RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 EMC2Q15006 297 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 LRRC36Q1X8D7 754 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.39□□□□□ -0.59
PATJ-207ENST00000484562 GALNT4Q8N4A0 578 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 EIF4E1BA6NMX2 242 aaKnown RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 NR1I3Q14994 352 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 AGAP9Q5VTM2 703 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 USP38Q8NB14 1042 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 ISCA1Q9BUE6 129 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 RMND5AQ9H871 391 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SOX13Q9UN79 622 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 STRNO43815 780 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 EXTL3O43909 919 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 CAND2O75155 1236 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 ITGA4P13612 1032 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SOX6P35712 828 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 MTF1Q14872 753 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SDE2Q6IQ49 451 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SRBD1Q8N5C6 995 aaKnown RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 MS4A14Q96JA4 679 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 ZNF668Q96K58 619 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 ZNF512Q96ME7 567 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 ILKAPQ9H0C8 392 aaPredicted RBP11.39□□□□□ -0.59
PATJ-207ENST00000484562 EPC1Q9H2F5 836 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 SESN1Q9Y6P5 492 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 CDC42BPGQ6DT37 1551 aa11.39□□□□□ -0.59
PATJ-207ENST00000484562 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 ZNF185O15231 689 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 GLRA3O75311 464 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 RBP3P10745 1247 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 HARS2P49590 506 aaKnown RBP11.38□□□□□ -0.59
PATJ-207ENST00000484562 ITGA8P53708 1063 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 GEMP55040 296 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 RDM1Q8NG50 284 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 RIT2Q99578 217 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 BBS2Q9BXC9 721 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 SPACA6W5XKT8 324 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 UGGT1Q9NYU2 1555 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 IGSF9BQ9UPX0 1349 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 RNF103O00237 685 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 FOXN1O15353 648 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 ALOX15P16050 662 aaPredicted RBP11.38□□□□□ -0.59
PATJ-207ENST00000484562 COMTP21964 271 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 ACOT2P49753 483 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 TWF1Q12792 350 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 CCDC60Q8IWA6 550 aaPredicted RBP11.38□□□□□ -0.59
PATJ-207ENST00000484562 SH2D3CQ8N5H7 860 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 FEZF2Q8TBJ5 459 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 HPS3Q969F9 1004 aa11.38□□□□□ -0.59
PATJ-207ENST00000484562 MTMR4Q9NYA4 1195 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms