RNA–Protein interactions for RNA: ENST00000483415.5

EWSR1-217, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 3,231 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-217ENST00000483415 CCDC197Q8NCU1 140 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 GLIS3Q8NEA6 775 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 OR2W6PQ8NHA6 318 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TRAPPC12Q8WVT3 735 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 NLRP7Q8WX94 980 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 PRCCQ92733 491 aaPredicted RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 RBM41Q96IZ5 413 aaKnown RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 FDXACB1Q9BRP7 624 aaPredicted RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 FAM167BQ9BTA0 163 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 CLDN3O15551 220 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 SORBS3O60504 671 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TACC1O75410 805 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 SELPP16109 830 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 NLRP11P59045 1033 aaKnown RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 NCALDP61601 193 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 PPARDQ03181 441 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 CETN1Q12798 172 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 EIF1ADQ8N9N8 165 aaKnown RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 HPS3Q969F9 1004 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 CHMP6Q96FZ7 201 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 MS4A14Q96JA4 679 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TMEM8AQ9HCN3 771 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 CDY2AQ9Y6F7 541 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 NCK2O43639 380 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 AKAP3O75969 853 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 LCA5LO95447 670 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 RARAP10276 462 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 SNRNP35Q16560 246 aaKnown RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 DNAJB3Q8WWF6 145 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 SLC35C1Q96A29 364 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 NAF1Q96HR8 494 aaKnown RBP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TMEM106CQ9BVX2 250 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 FAM129AQ9BZQ8 928 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 LRRC42Q9Y546 428 aa11.47□□□□□ -0.57
EWSR1-217ENST00000483415 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.47□□□□□ -0.57
EWSR1-217ENST00000483415 TSC2P49815 1807 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 XPOTO43592 962 aaKnown RBP11.46□□□□□ -0.57
EWSR1-217ENST00000483415 EXOC3O60645 756 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 SMIM24O75264 130 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 KCNE1P15382 129 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 VAMP7P51809 220 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 FAM189BP81408 668 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 USP4Q13107 963 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 LBRQ14739 615 aaKnown RBP11.46□□□□□ -0.57
EWSR1-217ENST00000483415 IFI16Q16666 785 aaKnown RBP11.46□□□□□ -0.57
EWSR1-217ENST00000483415 GALNTL6Q49A17 601 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 CMPK2Q5EBM0 449 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 HHATQ5VTY9 493 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 CPLX4Q7Z7G2 160 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 NELFCDQ8IXH7 590 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.46□□□□□ -0.572e-7■■■■■ 64.2
EWSR1-217ENST00000483415 POMGNT1Q8WZA1 660 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 DEFB118Q96PH6 123 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 PLEKHG4BQ96PX9 1271 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 PSMB7Q99436 277 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 ZCWPW1Q9H0M4 648 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 CDT1Q9H211 546 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 CNTN3Q9P232 1028 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.57
EWSR1-217ENST00000483415 A8MUI8 341 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 EOMESO95936 686 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 ATICP31939 592 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 HNRNPH3P31942 346 aaKnown RBP11.46□□□□□ -0.58
EWSR1-217ENST00000483415 MTIF2P46199 727 aaKnown RBP11.46□□□□□ -0.58
EWSR1-217ENST00000483415 ALKAL1Q6UXT8 129 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 TEKT4Q8WW24 435 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 IFT43Q96FT9 208 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 XPO6Q96QU8 1125 aaKnown RBP11.46□□□□□ -0.58
EWSR1-217ENST00000483415 MSTO1Q9BUK6 570 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 NOC4LQ9BVI4 516 aaKnown RBP11.46□□□□□ -0.58
EWSR1-217ENST00000483415 LRRC4CQ9HCJ2 640 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 PCMTD2Q9NV79 361 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 ADAM22Q9P0K1 906 aa11.46□□□□□ -0.58
EWSR1-217ENST00000483415 KIF4AO95239 1232 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 VIMP08670 466 aaKnown RBP11.45□□□□□ -0.58
EWSR1-217ENST00000483415 CKBP12277 381 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 ARF4P18085 180 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-217ENST00000483415 GNAZP19086 355 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 RANBP1P43487 201 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 KLHDC7AQ5VTJ3 777 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 NECAB2Q7Z6G3 386 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 SDCCAG8Q86SQ7 713 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-217ENST00000483415 TLCD1Q96CP7 247 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 BICD1Q96G01 975 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 SIK3Q9Y2K2 1263 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 GIT1Q9Y2X7 761 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 GOLGA6L10A6NI86 522 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 CHRNA1P02708 482 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 ALDH3A1P30838 453 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 HOXA11P31270 313 aaPredicted RBP11.45□□□□□ -0.58
EWSR1-217ENST00000483415 PAFAH1B1P43034 410 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 IGBP1P78318 339 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 PGBD4Q96DM1 585 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 NLRP4Q96MN2 994 aa11.45□□□□□ -0.58
EWSR1-217ENST00000483415 SYT15Q9BQS2 421 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms