RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 KINO60870 393 aaKnown RBP25.77■■□□□ 1.72
CPNE1-223ENST00000475146 CST3P01034 146 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-223ENST00000475146 LHX1P48742 406 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 TUFMP49411 452 aaKnown RBP25.77■■□□□ 1.72
CPNE1-223ENST00000475146 INTS6LQ5JSJ4 861 aaKnown RBP25.77■■□□□ 1.72
CPNE1-223ENST00000475146 PRSS36Q5K4E3 855 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 PARM1Q6UWI2 310 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 MTSS1LQ765P7 747 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 BMP8AQ7Z5Y6 402 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 SLC44A3Q8N4M1 653 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 FAM200AQ8TCP9 573 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 GSDMAQ96QA5 445 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 ACBD6Q9BR61 282 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 DNAJC25Q9H1X3 360 aa25.77■■□□□ 1.72
CPNE1-223ENST00000475146 GADD45BO75293 160 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-223ENST00000475146 PCSK1P29120 753 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 CCR2P41597 374 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 AP3M2P53677 418 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 MYL6P60660 151 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 TNNC1P63316 161 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 NFE2Q16621 373 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-223ENST00000475146 DPH6Q7L8W6 267 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 SUGP1Q8IWZ8 645 aaKnown RBP25.76■■□□□ 1.71
CPNE1-223ENST00000475146 FGF14Q92915 247 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 TMLHEQ9NVH6 421 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 GDE1Q9NZC3 331 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 FBXL21Q9UKT6 434 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 PCDHB5Q9Y5E4 795 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 PCDHA5Q9Y5H7 936 aa25.76■■□□□ 1.71
CPNE1-223ENST00000475146 GABRDO14764 452 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 HCRTO43612 131 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 RPL13P26373 211 aaKnown RBP25.75■■□□□ 1.71
CPNE1-223ENST00000475146 EPHA5P54756 1037 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 DLG4P78352 724 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 VEPH1Q14D04 833 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 NFIL3Q16649 462 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 ZNF658Q5TYW1 1059 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-223ENST00000475146 TDRD10Q5VZ19 366 aaKnown RBP25.75■■□□□ 1.71
CPNE1-223ENST00000475146 TMC2Q8TDI7 906 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 SYAP1Q96A49 352 aaPredicted RBP25.75■■□□□ 1.71
CPNE1-223ENST00000475146 ASB3Q9Y575 518 aa25.75■■□□□ 1.71
CPNE1-223ENST00000475146 PDGFBP01127 241 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-223ENST00000475146 HAPLN1P10915 354 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-223ENST00000475146 GJA1P17302 382 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 ATICP31939 592 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 CLDN10P78369 228 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 WDR72Q3MJ13 1102 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 ITIH5Q86UX2 942 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 FBXL6Q8N531 539 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 KBTBD7Q8WVZ9 684 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 KXD1Q9BQD3 176 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 LPIN3Q9BQK8 851 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 PI4K2AQ9BTU6 479 aa25.74■■□□□ 1.71
CPNE1-223ENST00000475146 RPP25Q9BUL9 199 aaKnown RBP25.74■■□□□ 1.71
CPNE1-223ENST00000475146 AKAP3O75969 853 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 MICAL2O94851 1124 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 CFHP08603 1231 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 SRFP11831 508 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 ATF6P18850 670 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 WARSP23381 471 aaKnown RBP25.73■■□□□ 1.71
CPNE1-223ENST00000475146 PRCPP42785 496 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 ADAM9Q13443 819 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 NCOA4Q13772 614 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 ZCWPW2Q504Y3 356 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 LIMS2Q7Z4I7 341 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 DNAJB7Q7Z6W7 309 aaPredicted RBP25.73■■□□□ 1.71
CPNE1-223ENST00000475146 TMC8Q8IU68 726 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 FAM186BQ8IYM0 893 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 PSMG2Q969U7 264 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 SYT15Q9BQS2 421 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 SNX25Q9H3E2 840 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 MFSD1Q9H3U5 465 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 NXF1Q9UBU9 619 aaKnown RBP25.73■■□□□ 1.71
CPNE1-223ENST00000475146 GTF3C4Q9UKN8 822 aa25.73■■□□□ 1.71
CPNE1-223ENST00000475146 NRG2O14511 850 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-223ENST00000475146 MAPK13O15264 365 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 STAU1O95793 577 aaKnown RBP25.72■■□□□ 1.71
CPNE1-223ENST00000475146 C4BPAP04003 597 aaKnown RBP25.72■■□□□ 1.71
CPNE1-223ENST00000475146 KRT13P13646 458 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 VAMP7P51809 220 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 PSMC1P62191 440 aaKnown RBP25.72■■□□□ 1.71
CPNE1-223ENST00000475146 TAF12Q16514 161 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 CCDC142Q17RM4 750 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 ZNF699Q32M78 642 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 SPATA20Q8TB22 786 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 SHKBP1Q8TBC3 707 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 GIPC2Q8TF65 315 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 MRPL45Q9BRJ2 306 aaKnown RBP25.72■■□□□ 1.71
CPNE1-223ENST00000475146 XYLT2Q9H1B5 865 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 SLITRK6Q9H5Y7 841 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 CDH9Q9ULB4 789 aa25.72■■□□□ 1.71
CPNE1-223ENST00000475146 A0A1W2PRU2 124 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 MOSPD3O75425 235 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 PDGFRBP09619 1106 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 LMO2P25791 158 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 PSMC2P35998 433 aaKnown RBP25.71■■□□□ 1.71
CPNE1-223ENST00000475146 TEAD2Q15562 447 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 EDRF1Q3B7T1 1238 aa25.71■■□□□ 1.71
CPNE1-223ENST00000475146 INTS8Q75QN2 995 aaKnown RBP25.71■■□□□ 1.71
CPNE1-223ENST00000475146 SPATA2LQ8IUW3 424 aaPredicted RBP25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms