RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 ZNF213O14771 459 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 ADAM23O75077 832 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 SEMA7AO75326 666 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 ZNF217O75362 1048 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 OATP04181 439 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 GABRR2P28476 465 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 WEE1P30291 646 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 CSNK1EP49674 416 aaKnown RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 DNM2P50570 870 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 HAND2P61296 217 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 INSM1Q01101 510 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 TBR1Q16650 682 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 INF2Q27J81 1249 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 CEP85Q6P2H3 762 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 MFSD6Q6ZSS7 791 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 SFTPA1Q8IWL2 248 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 CACTIN-AS1Q8N1I8 211 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 KRI1Q8N9T8 703 aaKnown RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 RIN3Q8TB24 985 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 PI4K2BQ8TCG2 481 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 NUP210Q8TEM1 1887 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 DNASE2BQ8WZ79 361 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 SGF29Q96ES7 293 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 CCDC97Q96F63 343 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 TRIM6Q9C030 488 aaPredicted RBP7.31□□□□□ -1.24
HDAC3-206ENST00000471968 TASP1Q9H6P5 420 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 MINDY3Q9H8M7 445 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 IFT122Q9HBG6 1241 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 CD93Q9NPY3 652 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 PARP2Q9UGN5 583 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 ANAPC2Q9UJX6 822 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 YIPF1Q9Y548 306 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 SNX11Q9Y5W9 270 aa7.31□□□□□ -1.24
HDAC3-206ENST00000471968 STAB1Q9NY15 2570 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 E2F8A0AVK6 867 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 SPDYE3A6NKU9 549 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 MTSS1O43312 755 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 CYTH3O43739 400 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 MT-CO3P00414 261 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 CD97P48960 835 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 BFSP1Q12934 665 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 CLN3Q13286 438 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 CLCA4Q14CN2 919 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 UBE2SQ16763 222 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 PPP1R26Q5T8A7 1209 aaPredicted RBP7.3□□□□□ -1.24
HDAC3-206ENST00000471968 EMC10Q5UCC4 262 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 TSHZ3Q63HK5 1081 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 TPGS2Q68CL5 300 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 IQCA1Q86XH1 822 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 HACE1Q8IYU2 909 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 TMEM57Q8N5G2 664 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 TTC16Q8NEE8 873 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 PIGOQ8TEQ8 1089 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 ESR2Q92731 530 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 ERLEC1Q96DZ1 483 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 CPB2Q96IY4 423 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 ACAP3Q96P50 834 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 MTMR9Q96QG7 549 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 DNAJC25Q9H1X3 360 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 RIOX1Q9H6W3 641 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 NRBP2Q9NSY0 501 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 DONSONQ9NYP3 566 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 TCEAL9Q9UHQ7 104 aa7.3□□□□□ -1.24
HDAC3-206ENST00000471968 UBE4BO95155 1302 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 H0Y8X5 98 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 USP12O75317 370 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 B3GAT3O94766 335 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 ERLIN2O94905 339 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 GJB6O95452 261 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 PSAPP07602 524 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 NCAM1P13591 858 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 GNLYP22749 145 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 AVPR1AP37288 418 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 LSSP48449 732 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 CDR1P51861 262 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 PRKCEQ02156 737 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 HSF5Q4G112 596 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 CCDC178Q5BJE1 867 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 CATIPQ7Z7H3 387 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 GATAD2AQ86YP4 633 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 TBC1D10CQ8IV04 446 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 CMTM8Q8IZV2 173 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 MIER1Q8N108 512 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 ENAHQ8N8S7 591 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 RFFLQ8WZ73 363 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 USP13Q92995 863 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 GPATCH3Q96I76 525 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 SH2D3AQ9BRG2 576 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 SLC46A2Q9BY10 475 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 POLR1BQ9H9Y6 1135 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 CUEDC1Q9NWM3 386 aaPredicted RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 DUS2Q9NX74 493 aaKnown RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 AFF4Q9UHB7 1163 aaKnown RBP7.29□□□□□ -1.24
HDAC3-206ENST00000471968 ADAMTS1Q9UHI8 967 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 PCDHA6Q9UN73 950 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 SAMM50Q9Y512 469 aa7.29□□□□□ -1.24
HDAC3-206ENST00000471968 PCDHA8Q9Y5H6 950 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms