RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 RWDD3Q9Y3V2 267 aa12.63□□□□□ -0.39
RNF13-208ENST00000467996 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 MYH10P35580 1976 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 FGF18O76093 207 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 SOD2P04179 222 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PLEKP08567 350 aaPredicted RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 PAEPP09466 180 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PDGFRBP09619 1106 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 CYP11B1P15538 503 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 ACAT1P24752 427 aaKnown RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 LMO2P25791 158 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PBX2P40425 430 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 CCZ1BP86790 482 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 CCZ1P86791 482 aaPredicted RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 CDK17Q00537 523 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PTK2Q05397 1052 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 RTP2Q5QGT7 225 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 TAS1R1Q7RTX1 841 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 SPRED2Q7Z698 418 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 ACOT1Q86TX2 421 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 NOP9Q86U38 636 aaKnown RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 CCDC112Q8NEF3 446 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 SLC20A1Q8WUM9 679 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 CHP1Q99653 195 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 BAG1Q99933 345 aaPredicted RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 C17orf80Q9BSJ5 609 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PBX4Q9BYU1 374 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 PRO3102Q9H379 93 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 HAUS4Q9H6D7 363 aa12.62□□□□□ -0.39
RNF13-208ENST00000467996 NOCTQ9UK39 431 aaKnown RBP12.62□□□□□ -0.39
RNF13-208ENST00000467996 SOWAHDA6NJG2 315 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 C5orf67F2Z3F1 127 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 THAP12O43422 761 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 OAZ2O95190 189 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 CD19P15391 556 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 BRD2P25440 801 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 BMPR1AP36894 532 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 BPIFB4P59827 614 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 PSMC1P62191 440 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 PLCB3Q01970 1234 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 MRPL58Q14197 206 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 RAB30Q15771 203 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 KIAA0319Q5VV43 1072 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 ZNF571Q7Z3V5 609 aaPredicted RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 DDX53Q86TM3 631 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 KLHL23Q8NBE8 558 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 B3GALNT2Q8NCR0 500 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 OR10T2Q8NGX3 314 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 OLIG1Q8TAK6 271 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 TFAP2BQ92481 460 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 DDX1Q92499 740 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 TNIP3Q96KP6 325 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 SYT15Q9BQS2 421 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 ZSWIM1Q9BR11 485 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 SYT11Q9BT88 431 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 KCNF1Q9H3M0 494 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 PUF60Q9UHX1 559 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 BZW2Q9Y6E2 419 aaKnown RBP12.61□□□□□ -0.39
RNF13-208ENST00000467996 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
RNF13-208ENST00000467996 SSU72P8A0A1W2PR75 194 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 ATP2C2O75185 946 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 MMEP08473 750 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 VDRP11473 427 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CHRNB2P17787 502 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 PCSK1P29120 753 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 DEKP35659 375 aaKnown RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 GLUD2P49448 558 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 FMO1Q01740 532 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CDR2Q01850 454 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 TAP1Q03518 808 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 KRT17Q04695 432 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CCDC142Q17RM4 750 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 TAF3Q5VWG9 929 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 ZNF280DQ6N043 979 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 ANKS3Q6ZW76 656 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 TMTC1Q8IUR5 882 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CRYBG2Q8N1P7 616 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 HEXIM2Q96MH2 286 aaKnown RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 ZNF830Q96NB3 372 aaPredicted RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 AGPAT1Q99943 283 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 LPIN3Q9BQK8 851 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 ACBD6Q9BR61 282 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 PLVAPQ9BX97 442 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 DNAI2Q9GZS0 605 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 NKX2-4Q9H2Z4 354 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 NHEJ1Q9H9Q4 299 aaPredicted RBP12.6□□□□□ -0.39
RNF13-208ENST00000467996 CRTAC1Q9NQ79 661 aa12.6□□□□□ -0.39
RNF13-208ENST00000467996 CHST7Q9NS84 486 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms