RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 C15orf39Q6ZRI6 1047 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 GPR65Q8IYL9 337 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 SLC44A3Q8N4M1 653 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 LRRC52Q8N7C0 313 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 SUMF1Q8NBK3 374 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 KLHL5Q96PQ7 755 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 TTPALQ9BTX7 342 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 EMILIN2Q9BXX0 1053 aa20.55■□□□□ 0.88
USP11-205ENST00000467378 METTL14Q9HCE5 456 aaKnown RBP20.55■□□□□ 0.88
USP11-205ENST00000467378 MRPL17Q9NRX2 175 aaKnown RBP20.55■□□□□ 0.88
USP11-205ENST00000467378 MAP1BP46821 2468 aaKnown RBP20.55■□□□□ 0.88
USP11-205ENST00000467378 N4BP1O75113 896 aaKnown RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 SRFP11831 508 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 SDHBP21912 280 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 TKTP29401 623 aaKnown RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 PNPLA4P41247 253 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 CLCN4P51793 760 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 MARSP56192 900 aaKnown RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 ZACNQ401N2 412 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 TDRD10Q5VZ19 366 aaKnown RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 C11orf57Q6ZUT1 292 aaPredicted RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 SV2AQ7L0J3 742 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 CEP57Q86XR8 500 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 LNX1Q8TBB1 728 aaPredicted RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 GPR152Q8TDT2 470 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 SENP8Q96LD8 212 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 ZNF560Q96MR9 790 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 FUCA2Q9BTY2 467 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 ARMCX3Q9UH62 379 aaPredicted RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 PCDHB8Q9UN66 801 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 SSX2IPQ9Y2D8 614 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 FRYLO94915 3013 aa20.54■□□□□ 0.88
USP11-205ENST00000467378 MTCL1Q9Y4B5 1905 aaKnown RBP20.54■□□□□ 0.88
USP11-205ENST00000467378 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 KPNA7A9QM74 516 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 C2CD2LO14523 706 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 SYN3O14994 580 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 VNN1O95497 513 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 FGFR1OPO95684 399 aaKnown RBP20.53■□□□□ 0.88
USP11-205ENST00000467378 GNA14O95837 355 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 URODP06132 367 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 ST3GAL2Q16842 350 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 SV2CQ496J9 727 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 CCDC40Q4G0X9 1142 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 PHLDB3Q6NSJ2 640 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 DSTYKQ6XUX3 929 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 IRF2BP1Q8IU81 584 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 ENOX1Q8TC92 643 aaKnown RBP20.53■□□□□ 0.88
USP11-205ENST00000467378 PIK3R5Q8WYR1 880 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 RXFP1Q9HBX9 757 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 DLGAP2Q9P1A6 1054 aa20.53■□□□□ 0.88
USP11-205ENST00000467378 SYCE3A1L190 88 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 GTF2H1P32780 548 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 GCLMP48507 274 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 ATXN1P54253 815 aaKnown RBP20.52■□□□□ 0.88
USP11-205ENST00000467378 MRPL58Q14197 206 aaKnown RBP20.52■□□□□ 0.88
USP11-205ENST00000467378 VARS2Q5ST30 1063 aaKnown RBP20.52■□□□□ 0.88
USP11-205ENST00000467378 PRSS55Q6UWB4 352 aaPredicted RBP20.52■□□□□ 0.88
USP11-205ENST00000467378 SLC35C1Q96A29 364 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 HPDLQ96IR7 371 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 DNAJC25Q9H1X3 360 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 ARHGEF3Q9NR81 526 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 FNIP2Q9P278 1114 aa20.52■□□□□ 0.88
USP11-205ENST00000467378 PHACTR2O75167 634 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 STAU1O95793 577 aaKnown RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 CNPP09543 421 aaKnown RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 MYL6P60660 151 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 BIRC3Q13489 604 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 TPD52L1Q16890 204 aaPredicted RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 TRIM59Q8IWR1 403 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 XYLT2Q9H1B5 865 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 THAP9Q9H5L6 903 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 TMEM8AQ9HCN3 771 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 WDR6Q9NNW5 1121 aaKnown RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 MAN1C1Q9NR34 630 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 GDAP2Q9NXN4 497 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 R3HCC1Q9Y3T6 440 aaKnown RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 TIMM13Q9Y5L4 95 aaPredicted RBP20.51■□□□□ 0.87
USP11-205ENST00000467378 CLUHO75153 1309 aa20.51■□□□□ 0.87
USP11-205ENST00000467378 CCDC195A0A1B0GUA6 201 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 CYB561D2O14569 222 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 STX10O60499 249 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 CYP11A1P05108 521 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 CCDC192P0DO97 292 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 TYMPP19971 482 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 ATICP31939 592 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 MYO1EQ12965 1108 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 TRPC3Q13507 836 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 NCOA4Q13772 614 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 PSMD5Q16401 504 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 ZSCAN23Q3MJ62 389 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 DCAF17Q5H9S7 520 aaPredicted RBP20.5■□□□□ 0.87
USP11-205ENST00000467378 TCERG1LQ5VWI1 586 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 KRT39Q6A163 491 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 PDXDC1Q6P996 788 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 ANKS3Q6ZW76 656 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 GPR161Q8N6U8 529 aaKnown RBP20.5■□□□□ 0.87
USP11-205ENST00000467378 APPL2Q8NEU8 664 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 NXPE3Q969Y0 559 aa20.5■□□□□ 0.87
USP11-205ENST00000467378 MYADMQ96S97 322 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms