RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 KIF20AO95235 890 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 MT-ND5P03915 603 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 GNAI2P04899 355 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 GRPP07492 148 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 IFIT2P09913 472 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 TXNP10599 105 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 CYP2C9P11712 490 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 BRAFP15056 766 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 KCNA2P16389 499 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 TNFSF4P23510 183 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 STT3AP46977 705 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ANXA11P50995 505 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 RPS16P62249 146 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 MXRA7P84157 204 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 PIGFQ07326 219 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SCAPQ12770 1279 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 HNRNPA0Q13151 305 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SLC13A2Q13183 592 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 DYRK1AQ13627 763 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 RAB32Q13637 225 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 CYP2A13Q16696 494 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 BEAN1Q3B7T3 259 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 AMOTQ4VCS5 1084 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 IZUMO3Q5VZ72 239 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 LMBRD2Q68DH5 695 aaPredicted RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SP5Q6BEB4 398 aaPredicted RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ARMC6Q6NXE6 501 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 TAPT1Q6NXT6 567 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 TAF2Q6P1X5 1199 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SRLQ86TD4 932 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 MAPKAPK5Q8IW41 473 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 FAM109AQ8N4B1 249 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 VGLL2Q8N8G2 317 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ATP11CQ8NB49 1132 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF384Q8TF68 577 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 EXTL1Q92935 676 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 LENG9Q96B70 501 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 MYEOVQ96EZ4 313 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 RIPOR3Q96MK2 946 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ADAM2Q99965 735 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 HEPHQ9BQS7 1158 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 REXO4Q9GZR2 422 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 PCED1AQ9H1Q7 454 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 CHST8Q9H2A9 424 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 DHX36Q9H2U1 1008 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF768Q9H5H4 540 aaKnown RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SACM1LQ9NTJ5 587 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 MYO1AQ9UBC5 1043 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 XPR1Q9UBH6 696 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 KCNE5Q9UJ90 142 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 OGDHLQ9ULD0 1010 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 SORCS3Q9UPU3 1222 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 TMX2Q9Y320 296 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 NEU2Q9Y3R4 380 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 USP15Q9Y4E8 981 aaPredicted RBP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 HS3ST4Q9Y661 456 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 COMMD10Q9Y6G5 202 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 AATKQ6ZMQ8 1374 aa2.36□□□□□ -2.03
NUCKS1-202ENST00000464938 PCSK5Q92824 1860 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 PRAMEF33A0A0G2JMD5 474 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 POM121BA6NF01 834 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 TMEM233B4DJY2 109 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 POLRMTO00411 1230 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 KPNA5O15131 536 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 NCK2O43639 380 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 PLA2G6O60733 806 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 PRAMEF10O60809 474 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ERN1O75460 977 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 RPS6KA4O75676 772 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 RECQL4O94761 1208 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SCAF4O95104 1147 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 GPANK1O95872 356 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 LDHAP00338 332 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 A1BGP04217 495 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ANXA2P07355 339 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 MYL3P08590 195 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SPATA31D3P0C874 917 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 SETSIPP0DME0 302 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 XRCC6P12956 609 aaKnown RBP eCLIP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 BTF3P20290 206 aaKnown RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 FGFR2P21802 821 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 KLRC1P26715 233 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 IL6STP40189 918 aaPredicted RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 KCNJ5P48544 419 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF134P52741 427 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 CXADRP78310 365 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 HSD11B2P80365 405 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 BTKQ06187 659 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF844Q08AG5 666 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 HLXQ14774 488 aaPredicted RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 LONRF3Q496Y0 759 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 FAM209BQ5JX69 171 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 DCAF12L1Q5VU92 463 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 FCRL6Q6DN72 434 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 HIBCHQ6NVY1 386 aaPredicted RBP2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 XRRA1Q6P2D8 792 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZNF585AQ6P3V2 769 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 ZDHHC24Q6UX98 284 aa2.35□□□□□ -2.03
NUCKS1-202ENST00000464938 RNF207Q6ZRF8 634 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms