RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 TUFMP49411 452 aaKnown RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CLCN4P51793 760 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 MFAP3P55082 362 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 SLC8A3P57103 927 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 GCNT1Q02742 428 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ITIH3Q06033 890 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 GPR17Q13304 367 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ADAM15Q13444 863 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 SOWAHAQ2M3V2 549 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 MGAT5BQ3V5L5 792 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 SLC39A12Q504Y0 691 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 INTS6LQ5JSJ4 861 aaKnown RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 C1orf220Q5T0J3 134 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CDKAL1Q5VV42 579 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 IQCEQ6IPM2 695 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CYP26C1Q6V0L0 522 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 TMEM184AQ6ZMB5 413 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ITIH5Q86UX2 942 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 EHBP1Q8NDI1 1231 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CXorf38Q8TB03 319 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 JAKMIP2Q96AA8 810 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 FUBP3Q96I24 572 aaKnown RBP eCLIP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 FAM84AQ96KN4 292 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 RIPOR3Q96MK2 946 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 NECTIN4Q96NY8 510 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 FUCA2Q9BTY2 467 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 NT5C1AQ9BXI3 368 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 XYLT2Q9H1B5 865 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 VPS16Q9H269 839 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 UBE2ZQ9H832 354 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CYP4F11Q9HBI6 524 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ZDHHC7Q9NXF8 308 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 ABI2Q9NYB9 513 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 TAB2Q9NYJ8 693 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 EHD2Q9NZN4 543 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 HSFX1Q9UBD0 423 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 AFF4Q9UHB7 1163 aaKnown RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 CD207Q9UJ71 328 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 BARX2Q9UMQ3 279 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-206ENST00000462613 POLIQ9UNA4 740 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 DAAM1Q9Y4D1 1078 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 PCDHGC5Q9Y5F6 944 aa6.81□□□□□ -1.32
SF3B1-206ENST00000462613 WDR27A2RRH5 827 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 GABRDO14764 452 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CBFA2T2O43439 604 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 TBC1D4O60343 1298 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 OBSL1O75147 1896 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ZMYND10O75800 440 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ABLIM3O94929 683 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 PDGFRBP09619 1106 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 HNRNPA1P09651 372 aaKnown RBP eCLIP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 WEE2P0C1S8 567 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 EPCAMP16422 314 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CD58P19256 250 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ACAT1P24752 427 aaKnown RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 MTHFRP42898 656 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 NDST1P52848 882 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 COPB1P53618 953 aaKnown RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 EPHB3P54753 998 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF445P59923 1031 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 RPL10AP62906 217 aaKnown RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CYP27A1Q02318 531 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 UBXN1Q04323 297 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ADCY1Q08828 1119 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 LRMPQ12912 555 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CUL2Q13617 745 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 KRT31Q15323 416 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CTC1Q2NKJ3 1217 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ATAT1Q5SQI0 421 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SMYD5Q6GMV2 418 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SPOPLQ6IQ16 392 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ANKRD54Q6NXT1 300 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 TRIM65Q6PJ69 517 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 DENND4AQ7Z401 1863 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 IRF2BP1Q8IU81 584 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 FMNL3Q8IVF7 1028 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 TCEAL8Q8IYN2 117 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 TMEM130Q8N3G9 435 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 LEMD2Q8NC56 503 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 B3GALNT2Q8NCR0 500 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SLC7A14Q8TBB6 771 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SLC22A17Q8WUG5 538 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SEMA4DQ92854 862 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ZNF512Q96ME7 567 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 PGLYRP2Q96PD5 576 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 GCNAQ96QF7 691 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 MED15Q96RN5 788 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SEPT5Q99719 369 aaPredicted RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CRACR2AQ9BSW2 395 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 MED10Q9BTT4 135 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 BCO2Q9BYV7 579 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ELOVL4Q9GZR5 314 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 INTS2Q9H0H0 1204 aaKnown RBP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ZCWPW1Q9H0M4 648 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 SMYD3Q9H7B4 428 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 CBX8Q9HC52 389 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 ABCB6Q9NP58 842 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.8□□□□□ -1.32
SF3B1-206ENST00000462613 APEX2Q9UBZ4 518 aa6.8□□□□□ -1.32
SF3B1-206ENST00000462613 LIMA1Q9UHB6 759 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms