RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SHKBP1Q8TBC3 707 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 SPPL2BQ8TCT7 592 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 PSMG2Q969U7 264 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 ELSPBP1Q96BH3 223 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 CGRRF1Q99675 332 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 SLITRK6Q9H5Y7 841 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 TBC1D17Q9HA65 648 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 DDX43Q9NXZ2 648 aaKnown RBP10.94□□□□□ -0.66
SF3A3-204ENST00000462258 ABI2Q9NYB9 513 aaPredicted RBP10.94□□□□□ -0.66
SF3A3-204ENST00000462258 CGNQ9P2M7 1197 aaKnown RBP10.94□□□□□ -0.66
SF3A3-204ENST00000462258 SNX9Q9Y5X1 595 aa10.94□□□□□ -0.66
SF3A3-204ENST00000462258 PIEZO1Q92508 2521 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 A0A1W2PQ27 194 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 A0A1W2PQ64 194 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 A0A1W2PQD8 194 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 A0A1W2PRU2 124 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 PRPF40AO75400 957 aaKnown RBP10.93□□□□□ -0.66
SF3A3-204ENST00000462258 PRR29P0C7W0 189 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 GJA1P17302 382 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 ATF6P18850 670 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 ACAT1P24752 427 aaKnown RBP10.93□□□□□ -0.66
SF3A3-204ENST00000462258 TUFMP49411 452 aaKnown RBP10.93□□□□□ -0.66
SF3A3-204ENST00000462258 GPC5P78333 572 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 PFKPQ01813 784 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 MYO1EQ12965 1108 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 STK4Q13043 487 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 VEPH1Q14D04 833 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 PSMD6Q15008 389 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 DUOXA2Q1HG44 320 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 FAM78AQ5JUQ0 283 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 OSTM1Q86WC4 334 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 TOP6BLQ8N6T0 577 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 SPATA18Q8TC71 538 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 FAM200AQ8TCP9 573 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 SMARCD2Q92925 531 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 CCDC127Q96BQ5 260 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 HPDLQ96IR7 371 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 ASB16Q96NS5 453 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 FNBP1Q96RU3 617 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 LPIN3Q9BQK8 851 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 LRRC3Q9BY71 257 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 GOLPH3LQ9H4A5 285 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 GDPD2Q9HCC8 539 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 ZNF334Q9HCZ1 680 aaPredicted RBP10.93□□□□□ -0.66
SF3A3-204ENST00000462258 GDAP2Q9NXN4 497 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 ASB3Q9Y575 518 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 PCDHB5Q9Y5E4 795 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 DMDP11532 3685 aa10.93□□□□□ -0.66
SF3A3-204ENST00000462258 STK25O00506 426 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 PI15O43692 258 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 EXOC3O60645 756 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 FGF19O95750 216 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 RPN1P04843 607 aaKnown RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 HAPLN1P10915 354 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 TNNI1P19237 187 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 GABRR2P28476 465 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 PSMD2Q13200 908 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 GRM2Q14416 872 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 MLF2Q15773 248 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 NFE2Q16621 373 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 INTS6LQ5JSJ4 861 aaKnown RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 STXBP5Q5T5C0 1151 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 TANGO2Q6ICL3 276 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 PHLDB3Q6NSJ2 640 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 TRAPPC11Q7Z392 1133 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 DNAJB7Q7Z6W7 309 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 LRRTM3Q86VH5 581 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 CCDC105Q8IYK2 499 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 ZSCAN18Q8TBC5 510 aaPredicted RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 ZSWIM3Q96MP5 696 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 GCNAQ96QF7 691 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 ACBD6Q9BR61 282 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 PLA2G2FQ9BZM2 168 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 ZFP14Q9HCL3 533 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 TMLHEQ9NVH6 421 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 FAM86C1Q9NVL1 165 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 ZNF638Q14966 1978 aaKnown RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 HELZP42694 1942 aaKnown RBP10.92□□□□□ -0.66
SF3A3-204ENST00000462258 GREB1Q4ZG55 1949 aa10.92□□□□□ -0.66
SF3A3-204ENST00000462258 NCANO14594 1321 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 H0Y858 1186 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 HCRTO43612 131 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 PCSK1P29120 753 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 LHX1P48742 406 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 PRKCQQ04759 706 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 SNW1Q13573 536 aaKnown RBP10.91□□□□□ -0.66
SF3A3-204ENST00000462258 TAF12Q16514 161 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 CCDC142Q17RM4 750 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 SOWAHAQ2M3V2 549 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 ARHGAP15Q53QZ3 475 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 KRBA2Q6ZNG9 492 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 TPRG1Q6ZUI0 275 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 GAREM2Q75VX8 874 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 PJA1Q8NG27 643 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 GIPC2Q8TF65 315 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 DEPDC1BQ8WUY9 529 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 KBTBD7Q8WVZ9 684 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 ATOH1Q92858 354 aaPredicted RBP10.91□□□□□ -0.66
SF3A3-204ENST00000462258 DNASE1L2Q92874 299 aa10.91□□□□□ -0.66
SF3A3-204ENST00000462258 CCDC47Q96A33 483 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms