RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 H0Y858 1186 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 TUFMP49411 452 aaKnown RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 MRE11P49959 708 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 TSPY1Q01534 308 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 PFKPQ01813 784 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 CYP24A1Q07973 514 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 MLF2Q15773 248 aaPredicted RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 KNOP1Q1ED39 458 aaKnown RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 DNAJB7Q7Z6W7 309 aaPredicted RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 ITIH5Q86UX2 942 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 ALYREFQ86V81 257 aaKnown RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 C12orf56Q8IXR9 622 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 DCP1BQ8IZD4 617 aaKnown RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 RDH13Q8NBN7 331 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 KIAA0895Q8NCT3 520 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 SCAND2PQ9GZW5 306 aaPredicted RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 ZFP14Q9HCL3 533 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 TMLHEQ9NVH6 421 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 FAM86C1Q9NVL1 165 aa20.34■□□□□ 0.85
COL5A1-203ENST00000460264 CGNQ9P2M7 1197 aaKnown RBP20.34■□□□□ 0.85
COL5A1-203ENST00000460264 FAM237AA0A1B0GTK4 181 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 DLATP10515 647 aaKnown RBP20.33■□□□□ 0.85
COL5A1-203ENST00000460264 SYKP43405 635 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 NDUFA8P51970 172 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 STARD6P59095 220 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 MYO1EQ12965 1108 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 STK4Q13043 487 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
COL5A1-203ENST00000460264 VEPH1Q14D04 833 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 PSMD6Q15008 389 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 KMT5BQ4FZB7 885 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 GAREM2Q75VX8 874 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 ADGRF2Q8IZF7 708 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 TOP6BLQ8N6T0 577 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 DTWD2Q8NBA8 298 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 ZSCAN18Q8TBC5 510 aaPredicted RBP20.33■□□□□ 0.85
COL5A1-203ENST00000460264 SPATA18Q8TC71 538 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 HPDLQ96IR7 371 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 SHDQ96IW2 340 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 CGRRF1Q99675 332 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 LPIN3Q9BQK8 851 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 SLITRK6Q9H5Y7 841 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 TRPV4Q9HBA0 871 aa20.33■□□□□ 0.85
COL5A1-203ENST00000460264 DDX43Q9NXZ2 648 aaKnown RBP20.33■□□□□ 0.85
COL5A1-203ENST00000460264 R3HCC1Q9Y3T6 440 aaKnown RBP20.33■□□□□ 0.85
COL5A1-203ENST00000460264 PTPRDP23468 1912 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 FGF19O95750 216 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 MYL1P05976 194 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 HAPLN1P10915 354 aaPredicted RBP20.32■□□□□ 0.84
COL5A1-203ENST00000460264 ACAT1P24752 427 aaKnown RBP20.32■□□□□ 0.84
COL5A1-203ENST00000460264 PRKCQQ04759 706 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 GRM2Q14416 872 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 SOWAHAQ2M3V2 549 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 SLC44A4Q53GD3 710 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 STXBP5Q5T5C0 1151 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 TRAPPC11Q7Z392 1133 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 LIMS2Q7Z4I7 341 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 OSTM1Q86WC4 334 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 PJA1Q8NG27 643 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 GOLGA5Q8TBA6 731 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 FAM200AQ8TCP9 573 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 ATOH1Q92858 354 aaPredicted RBP20.32■□□□□ 0.84
COL5A1-203ENST00000460264 FNBP1Q96RU3 617 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 ACBD6Q9BR61 282 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 DDX23Q9BUQ8 820 aaKnown RBP20.32■□□□□ 0.84
COL5A1-203ENST00000460264 FOXQ1Q9C009 403 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 GPR88Q9GZN0 384 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 GZF1Q9H116 711 aaPredicted RBP20.32■□□□□ 0.84
COL5A1-203ENST00000460264 PCDHB5Q9Y5E4 795 aa20.32■□□□□ 0.84
COL5A1-203ENST00000460264 NCANO14594 1321 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 A0A1W2PQ27 194 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 A0A1W2PQ64 194 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 A0A1W2PQD8 194 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 GABRDO14764 452 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 PRPF40AO75400 957 aaKnown RBP20.31■□□□□ 0.84
COL5A1-203ENST00000460264 TNNI1P19237 187 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 VIPR2P41587 438 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 MYL7Q01449 175 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 PSMD2Q13200 908 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 NFE2Q16621 373 aaPredicted RBP20.31■□□□□ 0.84
COL5A1-203ENST00000460264 INTS6LQ5JSJ4 861 aaKnown RBP20.31■□□□□ 0.84
COL5A1-203ENST00000460264 VITQ6UXI7 678 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 FSIP1Q8NA03 581 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 CCDC127Q96BQ5 260 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 PKMYT1Q99640 499 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 MKNK1Q9BUB5 465 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 DLGAP2Q9P1A6 1054 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 SIT1Q9Y3P8 196 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 PATJQ8NI35 1801 aa20.31■□□□□ 0.84
COL5A1-203ENST00000460264 HCRTO43612 131 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 DCNP07585 359 aaKnown RBP20.3■□□□□ 0.84
COL5A1-203ENST00000460264 PRR29P0C7W0 189 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 GABRR2P28476 465 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 LHX1P48742 406 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 BECN1Q14457 450 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 CCDC142Q17RM4 750 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 GIPC2Q8TF65 315 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 DEPDC1BQ8WUY9 529 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 KBTBD7Q8WVZ9 684 aa20.3■□□□□ 0.84
COL5A1-203ENST00000460264 DNASE1L2Q92874 299 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms