RNA–Protein interactions for RNA: ENST00000444502.5

TOP3B-210, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 4,163 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-210ENST00000444502 ZSWIM1Q9BR11 485 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 RHBDL2Q9NX52 303 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 SNCAIPQ9Y6H5 919 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 TPD52L2O43399 206 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 AKR1A1P14550 325 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 FLT3LGP49771 235 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 MARSP56192 900 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 CDR2Q01850 454 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 CYP24A1Q07973 514 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 RHOT1Q8IXI2 618 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 MDM1Q8TC05 714 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 GTF3C4Q9UKN8 822 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 NHSL1Q5SYE7 1610 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 CCDC160A6NGH7 325 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 MCF2LO15068 1137 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 LGALS2P05162 132 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 YBX3P16989 372 aaKnown RBP eCLIP11.14□□□□□ -0.631e-6■■□□□ 11.7
TOP3B-210ENST00000444502 HIRAP54198 1017 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 CUL3Q13618 768 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 SLC29A2Q14542 456 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 FSCN1Q16658 493 aaKnown RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 BMT2Q1RMZ1 405 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 C6orf118Q5T5N4 469 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 LBX2Q6XYB7 198 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 PDZD4Q76G19 769 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 VSIG1Q86XK7 387 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 SLC13A5Q86YT5 568 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 DNAAF3Q8N9W5 541 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 APPL2Q8NEU8 664 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 MYCBPAPQ8TBZ2 947 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 C7orf43Q8WVR3 580 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 LENG1Q96BZ8 264 aaPredicted RBP11.14□□□□□ -0.63
TOP3B-210ENST00000444502 MYH8P13535 1937 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 CACNA1SQ13698 1873 aa11.14□□□□□ -0.63
TOP3B-210ENST00000444502 NDC80O14777 642 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 LUC7L3O95232 432 aaKnown RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 CCNE2O96020 404 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 MARCKSL1P49006 195 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 SP3Q02447 781 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 SGSM1Q2NKQ1 1148 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 SYCP2LQ5T4T6 812 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 SRRM1Q8IYB3 904 aaKnown RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 MBOAT7Q96N66 472 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 MYH10P35580 1976 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 EXOC1LA0A1B0GW35 172 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 H0Y3Z8 333 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 GJB6O95452 261 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 GTF2H1P32780 548 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 MDH1P40925 334 aaKnown RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 PTGER2P43116 358 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 BCAR1P56945 870 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 NOGQ13253 232 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 ZNF484Q5JVG2 852 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 ACAD10Q6JQN1 1059 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 TEKT4Q8WW24 435 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 C17orf75Q9HAS0 396 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 HES2Q9Y543 173 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 PHF20L1A8MW92 1017 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 EDIL3O43854 480 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 SETDB1Q15047 1291 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 ANO5Q75V66 913 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 CCDC197Q8NCU1 140 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 CPSF3Q9UKF6 684 aaKnown RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 TIMM13Q9Y5L4 95 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 C4AP0C0L4 1744 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 C4BP0C0L5 1744 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 GLI3P10071 1580 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 WDR91A4D1P6 747 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 GMNCA6NCL1 334 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 PYGMP11217 842 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 KYNUQ16719 465 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 LONRF1Q17RB8 773 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 EPM2AIP1Q7L775 607 aaPredicted RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 BBOF1Q8ND07 529 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 RUBCNQ92622 972 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 KLHL29Q96CT2 875 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 MCEEQ96PE7 176 aa11.13□□□□□ -0.63
TOP3B-210ENST00000444502 DHX35Q9H5Z1 703 aaKnown RBP11.13□□□□□ -0.63
TOP3B-210ENST00000444502 ADCY3O60266 1144 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 POMCP01189 267 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 HMBSP08397 361 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 STAG3L1P0CL83 205 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 RALAP11233 206 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 HOXD13P35453 343 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GRIK1P39086 918 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GPS1Q13098 491 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 MAPK7Q13164 816 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 NUGGCQ68CJ6 796 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 BZW1Q7L1Q6 419 aaKnown RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 TMEM161BQ8NDZ6 487 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 EZH1Q92800 747 aaPredicted RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 ARHGEF2Q92974 986 aaKnown RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GBP5Q96PP8 586 aa11.12□□□□□ -0.63
TOP3B-210ENST00000444502 GOLGA4Q13439 2230 aaKnown RBP11.12□□□□□ -0.63
TOP3B-210ENST00000444502 A0A0A6YYK5 440 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms