RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 ART3Q13508 389 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
PTCH1-208ENST00000430669 H7C4K7 107 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ADCY3O60266 1144 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 NR2C2P49116 596 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 LIG3P49916 1009 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 IQSEC1Q6DN90 963 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 SLC47A2Q86VL8 602 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CBWD2Q8IUF1 395 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 REPS2Q8NFH8 660 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 TFB1MQ8WVM0 346 aaKnown RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 PAEPP09466 180 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 MORF4L2Q15014 288 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 RREB1Q92766 1687 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 MARSP56192 900 aaKnown RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 TTC39BQ5VTQ0 682 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 TNFRSF25Q93038 417 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 TSSK1BQ9BXA7 367 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 BARX2Q9UMQ3 279 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 UBR3Q6ZT12 1888 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CASQ2O14958 399 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 HSPA4LO95757 839 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 NNMTP40261 264 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 VSIG10LQ86VR7 867 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 DFFAO00273 331 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CPB1P15086 417 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 TAF2Q6P1X5 1199 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CFAP61Q8NHU2 1237 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CAVIN3Q969G5 261 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ESYT3A0FGR9 886 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 EEF2KO00418 725 aaKnown RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CCDC22O60826 627 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 WEE2P0C1S8 567 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ZBED2Q9BTP6 218 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 C3orf70A6NLC5 250 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 NCAM2O15394 837 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ESRRAP11474 423 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 MAGEA9P43362 315 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 GTF2BQ00403 316 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 IL17AQ16552 155 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ANKRD20A4Q4UJ75 823 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ANKRD20A2Q5SQ80 823 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ANKRD20A1Q5TYW2 823 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
PTCH1-208ENST00000430669 FARP1Q9Y4F1 1045 aaPredicted RBP12.09□□□□□ -0.47
PTCH1-208ENST00000430669 H3BRB1 525 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 FGFR4P22455 802 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 VGLL4Q14135 290 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 RCN2Q14257 317 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 NLRP14Q86W24 1093 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 MTG1Q9BT17 334 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 FAM124BQ9H5Z6 455 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 TUT1Q9H6E5 874 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 UBIAD1Q9Y5Z9 338 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 TRIP11Q15643 1979 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 PDHXO00330 501 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 H2AFYO75367 372 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF200P98182 395 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 GRIK5Q16478 980 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 NAT9Q9BTE0 207 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 METTL5Q9NRN9 209 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 KIF13BQ9NQT8 1826 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 KIF3CO14782 793 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 F9P00740 461 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 BRD2P25440 801 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 MDH1P40925 334 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 PLPPR4Q7Z2D5 763 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 CCNJLQ8IV13 435 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 USP13Q92995 863 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 TMEM176AQ96HP8 235 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 FAM47DPA6NHR8 397 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ACKR2O00590 384 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 CLNS1AP54105 237 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ZNF571Q7Z3V5 609 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 GOLPH3Q9H4A6 298 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 XAB2Q9HCS7 855 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 CISHQ9NSE2 258 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 BAG5Q9UL15 447 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 CALML6Q8TD86 181 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 RAPGEF5Q92565 580 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 THEGQ9P2T0 379 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 SGPL1O95470 568 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 VEGFAP15692 232 aaPredicted RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 TGM2P21980 687 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 GRIK4Q16099 956 aa12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTCH1-208ENST00000430669 GLT1D1Q96MS3 346 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms