RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 L1RE1Q9UN81 338 aa18.9■□□□□ 0.62
NUP50-208ENST00000430547 PCDHB5Q9Y5E4 795 aa18.9■□□□□ 0.62
NUP50-208ENST00000430547 PTPRJQ12913 1337 aa18.9■□□□□ 0.62
NUP50-208ENST00000430547 NUP210Q8TEM1 1887 aaPredicted RBP18.9■□□□□ 0.62
NUP50-208ENST00000430547 A0A1W2PRU2 124 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 KLRC4O43908 158 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 NDUFA8P51970 172 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 CYP24A1Q07973 514 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 TCF15Q12870 199 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 PSMD6Q15008 389 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 TEAD2Q15562 447 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 NFE2Q16621 373 aaPredicted RBP18.89■□□□□ 0.61
NUP50-208ENST00000430547 FAM78AQ5JUQ0 283 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 C12orf56Q8IXR9 622 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 TOP6BLQ8N6T0 577 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 SPATA18Q8TC71 538 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 SMARCD2Q92925 531 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 CCDC34Q96HJ3 373 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 ASB16Q96NS5 453 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 GCNAQ96QF7 691 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 CGRRF1Q99675 332 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 ACBD6Q9BR61 282 aa18.89■□□□□ 0.61
NUP50-208ENST00000430547 ZNF638Q14966 1978 aaKnown RBP18.89■□□□□ 0.61
NUP50-208ENST00000430547 A0A1W2PQ27 194 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 A0A1W2PQ64 194 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 A0A1W2PQD8 194 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 KIF20AO95235 890 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 RPN1P04843 607 aaKnown RBP18.88■□□□□ 0.61
NUP50-208ENST00000430547 PCSK1P29120 753 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 LHX1P48742 406 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 STK4Q13043 487 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 ARHGAP15Q53QZ3 475 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 TANGO2Q6ICL3 276 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 PHLDB3Q6NSJ2 640 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 TRAPPC11Q7Z392 1133 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 DNAJB7Q7Z6W7 309 aaPredicted RBP18.88■□□□□ 0.61
NUP50-208ENST00000430547 TMC8Q8IU68 726 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 CXorf38Q8TB03 319 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 SHKBP1Q8TBC3 707 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 ZSCAN18Q8TBC5 510 aaPredicted RBP18.88■□□□□ 0.61
NUP50-208ENST00000430547 LPIN3Q9BQK8 851 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 DENND4CQ5VZ89 1909 aa18.88■□□□□ 0.61
NUP50-208ENST00000430547 H0Y858 1186 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 PI15O43692 258 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 MOSPD3O75425 235 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 CLSTN1O94985 981 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 ACAT1P24752 427 aaKnown RBP18.87■□□□□ 0.61
NUP50-208ENST00000430547 GABRR2P28476 465 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 SNW1Q13573 536 aaKnown RBP18.87■□□□□ 0.61
NUP50-208ENST00000430547 MLF2Q15773 248 aaPredicted RBP18.87■□□□□ 0.61
NUP50-208ENST00000430547 INTS6LQ5JSJ4 861 aaKnown RBP18.87■□□□□ 0.61
NUP50-208ENST00000430547 DPH6Q7L8W6 267 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 TICRRQ7Z2Z1 1910 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 LRRTM3Q86VH5 581 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 KIAA0895Q8NCT3 520 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 ATOH1Q92858 354 aaPredicted RBP18.87■□□□□ 0.61
NUP50-208ENST00000430547 MMS19Q96T76 1030 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 ATXN3LQ9H3M9 355 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 BRD9Q9H8M2 597 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 GDPD2Q9HCC8 539 aa18.87■□□□□ 0.61
NUP50-208ENST00000430547 OBSL1O75147 1896 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 FAM237AA0A1B0GTK4 181 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 PHACTR2O75167 634 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 HAPLN1P10915 354 aaPredicted RBP18.86■□□□□ 0.61
NUP50-208ENST00000430547 ATF6P18850 670 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 FCARP24071 287 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 CDC25CP30307 473 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
NUP50-208ENST00000430547 NUCB2P80303 420 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 PRKCQQ04759 706 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 TRPC3Q13507 836 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 GRM2Q14416 872 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 SLC44A4Q53GD3 710 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 KRBA2Q6ZNG9 492 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 CCDC105Q8IYK2 499 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 GIPC2Q8TF65 315 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 E2F7Q96AV8 911 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 ZSWIM3Q96MP5 696 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 PI4K2AQ9BTU6 479 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 TRMT61BQ9BVS5 477 aaKnown RBP18.86■□□□□ 0.61
NUP50-208ENST00000430547 LRRC3Q9BY71 257 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 PLA2G2FQ9BZM2 168 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 ZNF334Q9HCZ1 680 aaPredicted RBP18.86■□□□□ 0.61
NUP50-208ENST00000430547 SIT1Q9Y3P8 196 aa18.86■□□□□ 0.61
NUP50-208ENST00000430547 NRG2O14511 850 aaPredicted RBP18.85■□□□□ 0.61
NUP50-208ENST00000430547 PSMC3P17980 439 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 STARD6P59095 220 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 TNNC1P63316 161 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 SOWAHAQ2M3V2 549 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 POTEHQ6S545 545 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 ALYREFQ86V81 257 aaKnown RBP18.85■□□□□ 0.61
NUP50-208ENST00000430547 SPATA2LQ8IUW3 424 aaPredicted RBP18.85■□□□□ 0.61
NUP50-208ENST00000430547 DEPDC1BQ8WUY9 529 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 TMLHEQ9NVH6 421 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 GTF3C4Q9UKN8 822 aa18.85■□□□□ 0.61
NUP50-208ENST00000430547 PDXKO00764 312 aa18.84■□□□□ 0.61
NUP50-208ENST00000430547 DPYSL4O14531 572 aa18.84■□□□□ 0.61
NUP50-208ENST00000430547 GABRDO14764 452 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms