RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 MYL7Q01449 175 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 SMARCB1Q12824 385 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 MYO1EQ12965 1108 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 CUL4BQ13620 913 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 STXBP5Q5T5C0 1151 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 RESP18Q5W5W9 173 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 VITQ6UXI7 678 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 ASCL5Q7RTU5 278 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 TMC8Q8IU68 726 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 C1orf210Q8IVY1 113 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 MFSD6LQ8IWD5 586 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 LRRC52Q8N7C0 313 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 OR5B17Q8NGF7 314 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 TTC8Q8TAM2 541 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 SPPL2BQ8TCT7 592 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 C2orf15Q8WU43 125 aaKnown RBP9.99□□□□□ -0.81
NUP50-206ENST00000422489 IRF7Q92985 503 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 NKD2Q969F2 451 aaPredicted RBP9.99□□□□□ -0.81
NUP50-206ENST00000422489 PSMG2Q969U7 264 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 E2F7Q96AV8 911 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 CCDC127Q96BQ5 260 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 GCNAQ96QF7 691 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 NELL2Q99435 816 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 MTMR12Q9C0I1 747 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 LTB4R2Q9NPC1 389 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 TMLHEQ9NVH6 421 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 INTS13Q9NVM9 706 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 DLGAP2Q9P1A6 1054 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 GTF3C4Q9UKN8 822 aa9.99□□□□□ -0.81
NUP50-206ENST00000422489 NDRG2Q9UN36 371 aaKnown RBP9.99□□□□□ -0.81
NUP50-206ENST00000422489 MAGED2Q9UNF1 606 aaPredicted RBP9.99□□□□□ -0.81
NUP50-206ENST00000422489 C2orf16Q68DN1 1984 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 A0A1B0GVL5 298 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 PVALEFA0A1B0GWK0 134 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 EIF3DO15371 548 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUP50-206ENST00000422489 NCAM2O15394 837 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 TGFB1I1O43294 461 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 LAMTOR5O43504 91 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 CLSTN1O94985 981 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 PDGFRBP09619 1106 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 DLATP10515 647 aaKnown RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 TNNI1P19237 187 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 GPR15P49685 360 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 KPNA1P52294 538 aaPredicted RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 CYP4F8P98187 520 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 CSTF1Q05048 431 aaKnown RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 NFE2Q16621 373 aaPredicted RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 DDR2Q16832 855 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 SDHAF4Q5VUM1 108 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 GAREM2Q75VX8 874 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 EPM2AIP1Q7L775 607 aaPredicted RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 HS2ST1Q7LGA3 356 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 TRAPPC11Q7Z392 1133 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 ARID3BQ8IVW6 561 aaPredicted RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 SCN4BQ8IWT1 228 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 XXYLT1Q8NBI6 393 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 CSGALNACT1Q8TDX6 532 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 DEPDC1BQ8WUY9 529 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 SCFD1Q8WVM8 642 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 FAM3CQ92520 227 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 DNASE1L2Q92874 299 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 SPATA32Q96LK8 384 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 FNBP1Q96RU3 617 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 MMS19Q96T76 1030 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 ACBD6Q9BR61 282 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 DDX23Q9BUQ8 820 aaKnown RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 MAGEF1Q9HAY2 307 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 AGPAT3Q9NRZ7 376 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 GDAP2Q9NXN4 497 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 HSFX1Q9UBD0 423 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 SIX4Q9UIU6 781 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 MRPS17Q9Y2R5 130 aaKnown RBP9.98□□□□□ -0.81
NUP50-206ENST00000422489 R4GN57 208 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 DENND4AQ7Z401 1863 aa9.98□□□□□ -0.81
NUP50-206ENST00000422489 PROB1E7EW31 1015 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 MAN2B1O00754 1011 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 HCRTO43612 131 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 EXOC3O60645 756 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 PHACTR2O75167 634 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 ATP2C2O75185 946 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 CST3P01034 146 aaPredicted RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 SLFN14P0C7P3 912 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 SP9P0CG40 484 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 ATF6P18850 670 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 CYP2F1P24903 491 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 TARSP26639 723 aaKnown RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 CDC25CP30307 473 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 LHX1P48742 406 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 RPL10AP62906 217 aaKnown RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 TRPC3Q13507 836 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 SNRNP35Q16560 246 aaKnown RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 INTS6LQ5JSJ4 861 aaKnown RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 CNNM4Q6P4Q7 775 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 SPATA2LQ8IUW3 424 aaPredicted RBP9.97□□□□□ -0.81
NUP50-206ENST00000422489 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
NUP50-206ENST00000422489 TMEM86AQ8N2M4 240 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms