RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PACSIN3Q9UKS6 424 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 L1RE1Q9UN81 338 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 MED16Q9Y2X0 877 aa5.65□□□□□ -1.5
HMGB1P49-201ENST00000418882 USP19O94966 1318 aa5.65□□□□□ -1.51
HMGB1P49-201ENST00000418882 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 E7ENX8 843 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 FAM227AF5H4B4 570 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 ERC2O15083 957 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 ESRRBO95718 433 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 GNAI2P04899 355 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 NDUFV1P49821 464 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 TAP2Q03519 686 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 GBX1Q14549 363 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 HLXQ14774 488 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 CNN3Q15417 329 aaKnown RBP5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 PREPLQ4J6C6 727 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 VPS53Q5VIR6 699 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 FAM160B1Q5W0V3 765 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 MICALCLQ6ZW33 695 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 MAEAQ7L5Y9 396 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 FAM156AQ8NDB6 213 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 CAVIN3Q969G5 261 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 TIFAQ96CG3 184 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 SLC46A1Q96NT5 459 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 NEU2Q9Y3R4 380 aa5.64□□□□□ -1.51
HMGB1P49-201ENST00000418882 TPP1O14773 563 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 PROM1O43490 865 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 GRPP07492 148 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 RHOP08100 348 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 U2AF1L5P0DN76 240 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 SRGNP10124 158 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 ATF3P18847 181 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 KCNJ5P48544 419 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 UCP3P55916 312 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 U2AF1Q01081 240 aaKnown RBP eCLIP5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 TAP1Q03518 808 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 MPP3Q13368 585 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 KIAA0895LQ68EN5 471 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 FAM109AQ8N4B1 249 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 SUPT20HQ8NEM7 779 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 SPATA5L1Q9BVQ7 753 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 TTYH3Q9C0H2 523 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 SMURF2Q9HAU4 748 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 STK32BQ9NY57 414 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 FOXJ2Q9P0K8 574 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 CHPF2Q9P2E5 772 aa5.63□□□□□ -1.51
HMGB1P49-201ENST00000418882 A0A0B4J269 797 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 A0A1W2PPL8 197 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 CAPN8A6NHC0 703 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 TMEM233B4DJY2 109 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 MYO1FO00160 1098 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 TBX3O15119 743 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 PDHA1P08559 390 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 ELFN1P0C7U0 828 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 AVPR1BP47901 424 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 GCLCP48506 637 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 SLC11A2P49281 568 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 CLK3P49761 638 aaKnown RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 BLOC1S1P78537 153 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 TUBB3Q13509 450 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 RBM20Q5T481 1227 aaKnown RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 OLFML1Q6UWY5 402 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 ANKS1AQ92625 1134 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 DPH1Q9BZG8 443 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 SERHLQ9NQF3 203 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 PIH1D1Q9NWS0 290 aaKnown RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 RAD54BQ9Y620 910 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 SPATA31A3Q5VYP0 1347 aa5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 FRMPD2Q68DX3 1309 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 WDR33Q9C0J8 1336 aaKnown RBP5.62□□□□□ -1.51
HMGB1P49-201ENST00000418882 WDR27A2RRH5 827 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 ADM5C9JUS6 153 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 F5H697 171 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 YY2O15391 372 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 PHGDHO43175 533 aaKnown RBP5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 ERBB2P04626 1255 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 LILRA4P59901 499 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 SIM1P81133 766 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 GPSM2P81274 684 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 SP2Q02086 613 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 CTBP1Q13363 440 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 GFOD2Q3B7J2 385 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 TMEM108Q6UXF1 575 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 TOR1AIP2Q8NFQ8 470 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 KBTBD7Q8WVZ9 684 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 TFAP2BQ92481 460 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 HEPHQ9BQS7 1158 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 AMBRA1Q9C0C7 1298 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 SIK2Q9H0K1 926 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 CPNE7Q9UBL6 633 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 PLEKHM1Q9Y4G2 1056 aa5.61□□□□□ -1.51
HMGB1P49-201ENST00000418882 ADGRA2Q96PE1 1338 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 A0A087WWL8 130 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 LMNAP02545 664 aaKnown RBP5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 CHRM2P08172 466 aa5.6□□□□□ -1.51
HMGB1P49-201ENST00000418882 EN2P19622 333 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms