RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 GRSF1Q12849 480 aaKnown RBP eCLIP16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 TXNDC11Q6PKC3 985 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 KRI1Q8N9T8 703 aaKnown RBP16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 TTC16Q8NEE8 873 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 OR10T2Q8NGX3 314 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 TMX3Q96JJ7 454 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 ZCWPW1Q9H0M4 648 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 GKN1Q9NS71 199 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 DPP3Q9NY33 737 aa16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 AGO2Q9UKV8 859 aaKnown RBP16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 MAGED2Q9UNF1 606 aaPredicted RBP16.82■□□□□ 0.28
SBDSP1-201ENST00000415772 K7ESF4 209 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 PRAMEF12O95522 483 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 CYP11A1P05108 521 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 ADRB1P08588 477 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 MCM6Q14566 821 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 WDR5BQ86VZ2 330 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 PIAS4Q8N2W9 510 aaPredicted RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 FAM160A2Q8N612 972 aaPredicted RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 POMGNT1Q8WZA1 660 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 MRPS31Q92665 395 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 SMG9Q9H0W8 520 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 C2CD2Q9Y426 696 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 PCDHB5Q9Y5E4 795 aa16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 NUP210Q8TEM1 1887 aaPredicted RBP16.81■□□□□ 0.28
SBDSP1-201ENST00000415772 PIRO00625 290 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 AXIN1O15169 862 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 FAM189A1O60320 539 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 ADRB2P07550 413 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 ATF6P18850 670 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 PLCG1P19174 1290 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 DDX6P26196 483 aaKnown RBP eCLIP16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 NMT1P30419 496 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 LONP1P36776 959 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 RUNX3Q13761 415 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 CCINQ13939 588 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 CMTM8Q8IZV2 173 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 MAB21L3Q8N8X9 362 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 LARP4BQ92615 738 aaKnown RBP16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 RAD54LQ92698 747 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 MKNK1Q9BUB5 465 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 KIF9Q9HAQ2 790 aa16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
SBDSP1-201ENST00000415772 ANO9A1A5B4 782 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 KPNA7A9QM74 516 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 ANKRD63C9JTQ0 380 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 PRPF40AO75400 957 aaKnown RBP16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 RPP40O75818 363 aaKnown RBP16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 IL18RAPO95256 599 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 CSH1P0DML2 217 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 CSH2P0DML3 217 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 HAPLN1P10915 354 aaPredicted RBP16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 WEE1P30291 646 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 PNPLA4P41247 253 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 ZNF131P52739 623 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 GTF2BQ00403 316 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 KARSQ15046 597 aaKnown RBP16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 POSTNQ15063 836 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 CACNA2D4Q7Z3S7 1137 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 NOC3LQ8WTT2 800 aaKnown RBP16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 KCNN1Q92952 543 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 LRRC3BQ96PB8 259 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 SLC46A2Q9BY10 475 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 ARRDC1-AS1Q9H2J1 176 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 TDP1Q9NUW8 608 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 EXOC7Q9UPT5 735 aa16.79■□□□□ 0.28
SBDSP1-201ENST00000415772 GDF9O60383 454 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 HUS1O60921 280 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 HOXA6P31267 233 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 PXNP49023 591 aaPredicted RBP16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 RPL10AP62906 217 aaKnown RBP16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 NFE2Q16621 373 aaPredicted RBP16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 ZC2HC1CQ53FD0 456 aaPredicted RBP16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 SLC39A4Q6P5W5 647 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 GAB3Q8WWW8 586 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 PI4K2AQ9BTU6 479 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 UXTQ9UBK9 157 aaPredicted RBP16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 CCDC39Q9UFE4 941 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 DNAH14Q0VDD8 3507 aa16.78■□□□□ 0.28
SBDSP1-201ENST00000415772 EXTL3O43909 919 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 TXLNAP40222 546 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 NLRP12P59046 1061 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 TFAMQ00059 246 aaKnown RBP16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 MYL7Q01449 175 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 PSMD2Q13200 908 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 LARP1BQ659C4 914 aaKnown RBP16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 DYMQ7RTS9 669 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 CPA6Q8N4T0 437 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 CACTINQ8WUQ7 758 aaKnown RBP16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 HVCN1Q96D96 273 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 LOXL4Q96JB6 756 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
SBDSP1-201ENST00000415772 TRPC7Q9HCX4 862 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms