RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 TMEM62Q0P6H9 643 aa18.52■□□□□ 0.56
SNED1-204ENST00000401884 BOLA3Q53S33 107 aa18.52■□□□□ 0.56
SNED1-204ENST00000401884 ATP6V1E2Q96A05 226 aa18.52■□□□□ 0.56
SNED1-204ENST00000401884 DDX20Q9UHI6 824 aaKnown RBP18.52■□□□□ 0.56
SNED1-204ENST00000401884 PIK3CDO00329 1044 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 ADAMTS3O15072 1205 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 MAP3K6O95382 1288 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 CLCN3P51790 818 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 OTUD4Q01804 1114 aaKnown RBP18.52■□□□□ 0.55
SNED1-204ENST00000401884 LNX1Q8TBB1 728 aaPredicted RBP18.52■□□□□ 0.55
SNED1-204ENST00000401884 PPP1R12AO14974 1030 aaPredicted RBP18.52■□□□□ 0.55
SNED1-204ENST00000401884 GAS2O43903 313 aaKnown RBP18.52■□□□□ 0.55
SNED1-204ENST00000401884 COG7P83436 770 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 MCL1Q07820 350 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 C4orf50Q6ZRC1 276 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 MYLK4Q86YV6 388 aaPredicted RBP18.52■□□□□ 0.55
SNED1-204ENST00000401884 ACTL9Q8TC94 416 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 AGR3Q8TD06 166 aa18.52■□□□□ 0.55
SNED1-204ENST00000401884 ANKRD63C9JTQ0 380 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 TRPA1O75762 1119 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 SLC25A27O95847 323 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 SH3BGRP55822 239 aaPredicted RBP18.51■□□□□ 0.55
SNED1-204ENST00000401884 FAXCQ5TGI0 409 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 AADACL2Q6P093 401 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 HNRNPCL1O60812 293 aaKnown RBP18.51■□□□□ 0.55
SNED1-204ENST00000401884 RARBP10826 455 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 PAMP19021 973 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 STX3Q13277 289 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 HSP90AA5PQ58FG0 334 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 HGSNATQ68CP4 663 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 TRIM67Q6ZTA4 783 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 LRRC6Q86X45 466 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 DTX3LQ8TDB6 740 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 POU5F1BQ06416 359 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 ITPRIPL1Q6GPH6 555 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 ACAD11Q709F0 780 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 EMC1Q8N766 993 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 DNAJC18Q9H819 358 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 PCMTD2Q9NV79 361 aa18.51■□□□□ 0.55
SNED1-204ENST00000401884 ENO1P06733 434 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 LONP2Q86WA8 852 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 MAP4K3Q8IVH8 894 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 NDUFAF2Q8N183 169 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 EXT2Q93063 718 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 BCL9LQ86UU0 1499 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 GH1P01241 217 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 NLRP11P59045 1033 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 TRIM56Q9BRZ2 755 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 ZNF518BQ9C0D4 1074 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 TTYH3Q9C0H2 523 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 IKZF4Q9H2S9 585 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 NAALADL1Q9UQQ1 740 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 DYNC1LI2O43237 492 aaPredicted RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 MARSP56192 900 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 C1QBPQ07021 282 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 KIF22Q14807 665 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 SHROOM1Q2M3G4 852 aaPredicted RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 CLMNQ96JQ2 1002 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 CD248Q9HCU0 757 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 SYNPO2Q9UMS6 1093 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 TRIM49D1C9J1S8 452 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 VWA5AO00534 786 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 TNFRSF8P28908 595 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 ALDH18A1P54886 795 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 FKBP1AP62942 108 aaKnown RBP18.5■□□□□ 0.55
SNED1-204ENST00000401884 ITIH4Q14624 930 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 DONSONQ9NYP3 566 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 PHTF1Q9UMS5 762 aa18.5■□□□□ 0.55
SNED1-204ENST00000401884 ITGB5P18084 799 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 TRADDQ15628 312 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 MDH1BQ5I0G3 518 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 SPOCD1Q6ZMY3 1216 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 MREGQ8N565 214 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 PGM2Q96G03 612 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 DCLK3Q9C098 648 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 MANSC1Q9H8J5 431 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 AFDNP55196 1824 aaKnown RBP18.49■□□□□ 0.55
SNED1-204ENST00000401884 ROBO3Q96MS0 1386 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 CCND1P24385 295 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 AP2B1P63010 937 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 OVGP1Q12889 678 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 OR6J1Q8NGC5 347 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 NDE1Q9NXR1 346 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 GTSE1Q9NYZ3 720 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 BTNL10A8MVZ5 291 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 APPL2Q8NEU8 664 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 PIP4K2CQ8TBX8 421 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 OSBPL1AQ9BXW6 950 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 CHST7Q9NS84 486 aa18.49■□□□□ 0.55
SNED1-204ENST00000401884 TAC1P20366 129 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 MORF4L2Q15014 288 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 BMT2Q1RMZ1 405 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 RABGAP1LQ5R372 815 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 RASSF3Q86WH2 238 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 THEM5Q8N1Q8 247 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 SLC26A7Q8TE54 656 aa18.48■□□□□ 0.55
SNED1-204ENST00000401884 ZBTB45Q96K62 511 aaPredicted RBP18.48■□□□□ 0.55
SNED1-204ENST00000401884 SALL4Q9UJQ4 1053 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms