RNA–Protein interactions for RNA: ENST00000396914.3

CHCHD4-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD4, Length 1,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-202ENST00000396914 RFPL2O75678 378 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 CDH8P55286 799 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 SMRP1Q8NCR6 262 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 ACBD6Q9BR61 282 aa31.44■■■□□ 2.62
CHCHD4-202ENST00000396914 GABRDO14764 452 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 TACC1O75410 805 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 SMAD4Q13485 552 aaKnown RBP31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 PUS10Q3MIT2 529 aaKnown RBP31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 LIMS2Q7Z4I7 341 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 ASB2Q96Q27 587 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 PIDD1Q9HB75 910 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 APOBEC3GQ9HC16 384 aaKnown RBP31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 FAM50BQ9Y247 325 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 BRWD1Q9NSI6 2320 aa31.43■■■□□ 2.62
CHCHD4-202ENST00000396914 KCNJ18B7U540 433 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 ZMYND10O75800 440 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 WEE2P0C1S8 567 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 LMO2P25791 158 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 MYL5Q02045 173 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 ITIH3Q06033 890 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 KCNJ12Q14500 433 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 NIF3L1Q9GZT8 377 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 ADAM7Q9H2U9 754 aa31.42■■■□□ 2.62
CHCHD4-202ENST00000396914 MTCL1Q9Y4B5 1905 aaKnown RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 A8MXQ7 604 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 PES1O00541 588 aaKnown RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 MBTPS2O43462 519 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 PRKCSHP14314 528 aaPredicted RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 LRMPQ12912 555 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 ZSCAN23Q3MJ62 389 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 INTS6LQ5JSJ4 861 aaKnown RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 SYT15Q9BQS2 421 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 S1PR5Q9H228 398 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 ZDHHC7Q9NXF8 308 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 COQ4Q9Y3A0 265 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 USP15Q9Y4E8 981 aaPredicted RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 GRXCR2A6NFK2 248 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 SEC24AO95486 1093 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 FAM163BP0C2L3 166 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 ASPAP45381 313 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 PSMC1P62191 440 aaKnown RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 UVSSAQ2YD98 709 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 LRRTM3Q86VH5 581 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 AOPEPQ8N6M6 819 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 ATAD1Q8NBU5 361 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 SDCBP2Q9H190 292 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 FANCLQ9NW38 375 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 ABI2Q9NYB9 513 aaPredicted RBP31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 GTF3C4Q9UKN8 822 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 CDH9Q9ULB4 789 aa31.41■■■□□ 2.62
CHCHD4-202ENST00000396914 MTMR11A4FU01 709 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 P4HA2O15460 535 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 CCL16O15467 120 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 LRG1P02750 347 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 DUSP4Q13115 394 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 TCEAL8Q8IYN2 117 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 SMG7Q92540 1137 aaKnown RBP31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 RIPOR3Q96MK2 946 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 CDH22Q9UJ99 828 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 MAFFQ9ULX9 164 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 SLC27A5Q9Y2P5 690 aa31.4■■■□□ 2.62
CHCHD4-202ENST00000396914 ATP2C2O75185 946 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 CD58P19256 250 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 MAN2A1Q16706 1144 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 TCP11X2Q5H9J9 407 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 ATAT1Q5SQI0 421 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 TATDN2Q93075 761 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 TUBGCP2Q9BSJ2 902 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 PCDHB5Q9Y5E4 795 aa31.39■■■□□ 2.62
CHCHD4-202ENST00000396914 HNRNPA1P09651 372 aaKnown RBP eCLIP31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 NFE2Q16621 373 aaPredicted RBP31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 GPR149Q86SP6 731 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 CMASQ8NFW8 434 aaPredicted RBP31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 SEPT5Q99719 369 aaPredicted RBP31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 BCO2Q9BYV7 579 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 PRKD2Q9BZL6 878 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 CYP3A43Q9HB55 503 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 TMLHEQ9NVH6 421 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 INSL5Q9Y5Q6 135 aa31.38■■■□□ 2.61
CHCHD4-202ENST00000396914 PMM2O15305 246 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 XYLBO75191 536 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 IL9P15248 144 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 EEF1GP26641 437 aaKnown RBP31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 SMARCB1Q12824 385 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 MGAT5BQ3V5L5 792 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 RTL10Q7L3V2 364 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 SPATA2LQ8IUW3 424 aaPredicted RBP31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 C2orf15Q8WU43 125 aaKnown RBP31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 NT5C1BQ96P26 610 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 DPEP3Q9H4B8 488 aa31.37■■■□□ 2.61
CHCHD4-202ENST00000396914 MYBPHLA2RUH7 354 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 TPM2P07951 284 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 CDK11BP21127 795 aaKnown RBP31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 MTHFRP42898 656 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 ZNF165P49910 485 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 CYP27A1Q02318 531 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 CCDC142Q17RM4 750 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 FEZF2Q8TBJ5 459 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 SPPL2BQ8TCT7 592 aa31.36■■■□□ 2.61
CHCHD4-202ENST00000396914 FUCA2Q9BTY2 467 aa31.36■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms