RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 CYP2D6P10635 497 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 NDEL1Q9GZM8 345 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 CATSPERBQ9H7T0 1116 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 ACAD9Q9H845 621 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 SELENONQ9NZV5 590 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 LZTS1Q9Y250 596 aa9.99□□□□□ -0.81
SNX1-202ENST00000380285 CAB39Q9Y376 341 aaPredicted RBP9.99□□□□□ -0.81
SNX1-202ENST00000380285 KLRC1P26715 233 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 STK4Q13043 487 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 MCEEQ96PE7 176 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 MRPS26Q9BYN8 205 aaKnown RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 CD209Q9NNX6 404 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 GAS2O43903 313 aaKnown RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 FSBPO95073 299 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 PDGFRAP16234 1089 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 PLOD1Q02809 727 aaPredicted RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 LRRC36Q1X8D7 754 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 AGAP9Q5VTM2 703 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 BTBD8Q5XKL5 378 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 C11orf63Q6NUN7 778 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 MOXD1Q6UVY6 613 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ASIC4Q96FT7 647 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 CD248Q9HCU0 757 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 FAM153AQ9UHL3 310 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 NARFQ9UHQ1 456 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ZNF263O14978 683 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 EXTL3O43909 919 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 VCAM1P19320 739 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 SESN2P58004 480 aaPredicted RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 SZRD1Q7Z422 152 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 LPAR1Q92633 364 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 RIT2Q99578 217 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ZNF518BQ9C0D4 1074 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 SAR1AQ9NR31 198 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 CD4P01730 458 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 SWSAP1Q6NVH7 229 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 MICU2Q8IYU8 434 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ALG13Q9NP73 1137 aaKnown RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 NDFIP2Q9NV92 336 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 TRIM10Q9UDY6 481 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 GGT7Q9UJ14 662 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 IQSEC2Q5JU85 1478 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 TNFRSF8P28908 595 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ZNF543Q08ER8 600 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 GALNT4Q8N4A0 578 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 DBNDD1Q9H9R9 158 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ANKEF1Q9NU02 776 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ATXN2Q99700 1313 aaKnown RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 COL15A1P39059 1388 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 DNAJC3Q13217 504 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 NME3Q13232 169 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 PDK2Q15119 407 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 TFDP3Q5H9I0 405 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 TWF2Q6IBS0 349 aaKnown RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 BNC2Q6ZN30 1099 aaPredicted RBP9.98□□□□□ -0.81
SNX1-202ENST00000380285 OR2W6PQ8NHA6 318 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ELMO2Q96JJ3 720 aa9.98□□□□□ -0.81
SNX1-202ENST00000380285 ATP9BO43861 1147 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NDUFS3O75489 264 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 RPS6KA4O75676 772 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PRDX5P30044 214 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PKN2Q16513 984 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 EFHC1Q5JVL4 640 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 C6orf10Q5SRN2 563 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CENPTQ96BT3 561 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 RNF146Q9NTX7 359 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 HEY2Q9UBP5 337 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TJP2Q9UDY2 1190 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CHMP2BQ9UQN3 213 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 OVOS2A0A0J9YW53 1432 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 OVOS2Q6IE36 1432 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CAND2O75155 1236 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 ANXA9O76027 345 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 GUCY1A2P33402 732 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 SULT1E1P49888 294 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 MYBPC2Q14324 1141 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 CCDC103Q8IW40 242 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 SHCBP1Q8NEM2 672 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 SARS2Q9NP81 518 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 NMT2O60551 498 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 TNFAIP8O95379 198 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NFX1Q12986 1120 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 LAMC2Q13753 1193 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 ARMCX4Q5H9R4 360 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PCNX4Q63HM2 1172 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 DCUN1D1Q96GG9 259 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 NMRK1Q9NWW6 199 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 MAP3K20Q9NYL2 800 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 ADAM30Q9UKF2 790 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 HPSEQ9Y251 543 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 PRR36Q9H6K5 1346 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 DFFAO00273 331 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 KPNA4O00629 521 aaPredicted RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 GPD1P21695 349 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 RXRGP48443 463 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 SNRNP48Q6IEG0 339 aaKnown RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 TAF2Q6P1X5 1199 aa9.97□□□□□ -0.81
SNX1-202ENST00000380285 ARID3BQ8IVW6 561 aaPredicted RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
SNX1-202ENST00000380285 KIF12Q96FN5 646 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms