RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 TMEM154Q6P9G4 183 aa8.78□□□□□ -1
VPS36-201ENST00000378060 THEM5Q8N1Q8 247 aa8.78□□□□□ -1
VPS36-201ENST00000378060 E2F7Q96AV8 911 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CCDC134Q9H6E4 229 aa8.78□□□□□ -1
VPS36-201ENST00000378060 NDUFA13Q9P0J0 144 aa8.78□□□□□ -1
VPS36-201ENST00000378060 PDP2Q9P2J9 529 aa8.78□□□□□ -1
VPS36-201ENST00000378060 ARHGAP26Q9UNA1 814 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CDY2AQ9Y6F7 541 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CDY1Q9Y6F8 540 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SRRM3A6NNA2 597 aaPredicted RBP8.78□□□□□ -1
VPS36-201ENST00000378060 NFKBIAP25963 317 aa8.78□□□□□ -1
VPS36-201ENST00000378060 ACOT2P49753 483 aa8.78□□□□□ -1
VPS36-201ENST00000378060 PRAMEP78395 509 aa8.78□□□□□ -1
VPS36-201ENST00000378060 RBP5P82980 135 aa8.78□□□□□ -1
VPS36-201ENST00000378060 KPNB1Q14974 876 aaKnown RBP8.78□□□□□ -1
VPS36-201ENST00000378060 TTC39BQ5VTQ0 682 aaPredicted RBP8.78□□□□□ -1
VPS36-201ENST00000378060 C16orf87Q6PH81 154 aa8.78□□□□□ -1
VPS36-201ENST00000378060 C16orf89Q6UX73 402 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SH3RF1Q7Z6J0 888 aa8.78□□□□□ -1
VPS36-201ENST00000378060 RNF149Q8NC42 400 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SPATA18Q8TC71 538 aa8.78□□□□□ -1
VPS36-201ENST00000378060 EXT2Q93063 718 aa8.78□□□□□ -1
VPS36-201ENST00000378060 MCEEQ96PE7 176 aa8.78□□□□□ -1
VPS36-201ENST00000378060 DCLRE1BQ9H816 532 aa8.78□□□□□ -1
VPS36-201ENST00000378060 ZNRF3Q9ULT6 936 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SYCE1LA8MT33 242 aa8.78□□□□□ -1
VPS36-201ENST00000378060 EXTL3O43909 919 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CAND2O75155 1236 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SASH3O75995 380 aa8.78□□□□□ -1
VPS36-201ENST00000378060 DDNO94850 711 aaPredicted RBP8.78□□□□□ -1
VPS36-201ENST00000378060 GTF2H1P32780 548 aa8.78□□□□□ -1
VPS36-201ENST00000378060 RFC5P40937 340 aa8.78□□□□□ -1
VPS36-201ENST00000378060 SESN2P58004 480 aaPredicted RBP8.78□□□□□ -1
VPS36-201ENST00000378060 ABCE1P61221 599 aaKnown RBP8.78□□□□□ -1
VPS36-201ENST00000378060 TKFCQ3LXA3 575 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CDC42EP5Q6NZY7 148 aa8.78□□□□□ -1
VPS36-201ENST00000378060 NDUFAF2Q8N183 169 aa8.78□□□□□ -1
VPS36-201ENST00000378060 AENQ8WTP8 325 aaKnown RBP8.78□□□□□ -1
VPS36-201ENST00000378060 MTMR8Q96EF0 704 aa8.78□□□□□ -1
VPS36-201ENST00000378060 WRNIP1Q96S55 665 aa8.78□□□□□ -1
VPS36-201ENST00000378060 TLR10Q9BXR5 811 aa8.78□□□□□ -1
VPS36-201ENST00000378060 NSMCE4AQ9NXX6 385 aa8.78□□□□□ -1
VPS36-201ENST00000378060 CHMP2BQ9UQN3 213 aa8.78□□□□□ -1
VPS36-201ENST00000378060 ASTN2O75129 1339 aaPredicted RBP8.78□□□□□ -1
VPS36-201ENST00000378060 PSME4Q14997 1843 aa8.77□□□□□ -1
VPS36-201ENST00000378060 NR3C2P08235 984 aa8.77□□□□□ -1
VPS36-201ENST00000378060 HSD17B4P51659 736 aa8.77□□□□□ -1
VPS36-201ENST00000378060 INPP5AQ14642 412 aa8.77□□□□□ -1
VPS36-201ENST00000378060 BOLA3Q53S33 107 aa8.77□□□□□ -1
VPS36-201ENST00000378060 SPDYCQ5MJ68 293 aa8.77□□□□□ -1
VPS36-201ENST00000378060 LRRC6Q86X45 466 aa8.77□□□□□ -1
VPS36-201ENST00000378060 PGBD4Q96DM1 585 aa8.77□□□□□ -1
VPS36-201ENST00000378060 EPAS1Q99814 870 aa8.77□□□□□ -1
VPS36-201ENST00000378060 NIF3L1Q9GZT8 377 aa8.77□□□□□ -1
VPS36-201ENST00000378060 MCL1Q07820 350 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 C11orf63Q6NUN7 778 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 ZNF571Q7Z3V5 609 aaPredicted RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 DACT3Q96B18 629 aaPredicted RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 PPP1R16BQ96T49 567 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 TEX13BQ9BXU2 312 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 MRPL1Q9BYD6 325 aaKnown RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 OLFML3Q9NRN5 406 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 PHTF1Q9UMS5 762 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 C3orf70A6NLC5 250 aaPredicted RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 F8VZ95 297 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 MSH4O15457 936 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 GIT2Q14161 759 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 TRIP10Q15642 601 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 GJB7Q6PEY0 223 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 DLK2Q6UY11 383 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 ZNF662Q6ZS27 426 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 RFX8Q6ZV50 586 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 CLEC10AQ8IUN9 316 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 ZNF526Q8TF50 670 aaPredicted RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 ATP8B4Q8TF62 1192 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SCFD1Q8WVM8 642 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 KIF12Q96FN5 646 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 PPP1R2P1Q96PQ5 205 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 RIOX1Q9H6W3 641 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 CD248Q9HCU0 757 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 KLHL11Q9NVR0 708 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SLC24A2Q9UI40 661 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 DICER1Q9UPY3 1922 aaKnown RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 MTSS1O43312 755 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 IL18RAPO95256 599 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SLC4A1P02730 911 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 CDC42EP1Q00587 391 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 TSPY1Q01534 308 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 COG2Q14746 738 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 TMEM259Q4ZIN3 620 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 NLRP9Q7RTR0 991 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SUGP1Q8IWZ8 645 aaKnown RBP8.77□□□□□ -1.01
VPS36-201ENST00000378060 OR6P1Q8NGX9 317 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 SEPT1Q8WYJ6 367 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 NCLNQ969V3 563 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 CEP19Q96LK0 163 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 PACSIN1Q9BY11 444 aa8.77□□□□□ -1.01
VPS36-201ENST00000378060 GEMIN8Q9NWZ8 242 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms