RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 THRAP10827 490 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 NCKAP1LP55160 1127 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 LLGL1Q15334 1064 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ALLCQ8N6M5 410 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 PYROXD1Q8WU10 500 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 C1orf54Q8WWF1 131 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 BIRC8Q96P09 236 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ZNF696Q9H7X3 374 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SSX2IPQ9Y2D8 614 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 MTO1Q9Y2Z2 717 aaKnown RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 CAPN8A6NHC0 703 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SOBPA7XYQ1 873 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SORBS2O94875 1100 aaKnown RBP10.04□□□□□ -0.8
SF3A3-201ENST00000373019 CYP2C9P11712 490 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 FDFT1P37268 417 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SLC35G1Q2M3R5 365 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 DCAF6Q58WW2 860 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 RAD54LQ92698 747 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ATP6V0A1Q93050 837 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 HGH1Q9BTY7 390 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 OSBPL6Q9BZF3 934 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 STK17AQ9UEE5 414 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 ASIC3Q9UHC3 531 aa10.04□□□□□ -0.8
SF3A3-201ENST00000373019 DOT1LQ8TEK3 1739 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 A0A1B0GTW7 788 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CASQ2O14958 399 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CIB2O75838 187 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ENO1P06733 434 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 DLATP10515 647 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 RRM1P23921 792 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CPOXP36551 454 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 TRPC1P48995 793 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 HADHBP55084 474 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 EVX2Q03828 476 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ZBTB16Q05516 673 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CCNIQ14094 377 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ECM1Q16610 540 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CLEC4GQ6UXB4 293 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 RNF207Q6ZRF8 634 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ADGRA1Q86SQ6 560 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 TDRPQ86YL5 185 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 NLGN1Q8N2Q7 840 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 SAMD3Q8N6K7 520 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 UBL4BQ8N7F7 174 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 TMIGD2Q96BF3 282 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 PRPF18Q99633 342 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 OSBPL10Q9BXB5 764 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 MYH14Q7Z406 1995 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ANKRD36CQ5JPF3 1778 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 BAZ2AQ9UIF9 1905 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 EXOC1LA0A1B0GW35 172 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CCDC162PA2VCL2 907 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CYP19A1P11511 503 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 COMTP21964 271 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 S100A1P23297 94 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 IL6STP40189 918 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 KCNC4Q03721 635 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 LETM2Q2VYF4 491 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 C11orf63Q6NUN7 778 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 RANBP9Q96S59 729 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CCDC77Q9BR77 488 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 RSL24D1Q9UHA3 163 aaKnown RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CHORDC1Q9UHD1 332 aaPredicted RBP10.03□□□□□ -0.8
SF3A3-201ENST00000373019 APPL1Q9UKG1 709 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 CNTNAP4Q9C0A0 1308 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 PEX1O43933 1283 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 DGKIO75912 1065 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 MYL2P10916 166 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 KDSRQ06136 332 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 PSMD6Q15008 389 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 INAQ16352 499 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 MDH1BQ5I0G3 518 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 C6orf163Q5TEZ5 329 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 AHI1Q8N157 1196 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ACTRT2Q8TDY3 377 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 GPR88Q9GZN0 384 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 DRC3Q9H069 523 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ACP6Q9NPH0 428 aa10.03□□□□□ -0.8
SF3A3-201ENST00000373019 ANKRD62A6NC57 917 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 SORBS3O60504 671 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 TGDSO95455 350 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 FGRP09769 529 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 KRT15P19012 456 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 KRT4P19013 534 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 TCF7P36402 384 aaPredicted RBP10.02□□□□□ -0.8
SF3A3-201ENST00000373019 ARPC4P59998 168 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 MECOMQ03112 1051 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 PTK6Q13882 451 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 KRT81Q14533 505 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 TRIP10Q15642 601 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 FAM26FQ5R3K3 315 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 SEL1L2Q5TEA6 688 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 CYP4F22Q6NT55 531 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 ICA1LQ8NDH6 482 aa10.02□□□□□ -0.8
SF3A3-201ENST00000373019 ANAPC5Q9UJX4 755 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms