RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 LAMA5O15230 3695 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 DDX60Q8IY21 1712 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 AK9Q5TCS8 1911 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KLHL33A6NCF5 533 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC22A31A6NKX4 558 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CHURC1-FNTBB4DL54 471 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 RASA4BC9J798 803 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KIAA0355O15063 1070 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SGSM2O43147 1006 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TSPAN3O60637 253 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC4A1P02730 911 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 MT-ND3P03897 115 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 F13BP05160 661 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TPM3P06753 285 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PROS1P07225 676 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 C8AP07357 584 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SKILP12757 684 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SDSP20132 328 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ADMP35318 185 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ETV3P41162 512 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TNNT3P45378 269 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PHKA1P46020 1223 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 GP2P55259 537 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 UBXN1Q04323 297 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SNX17Q15036 470 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TAF12Q16514 161 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 MEA1Q16626 185 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 MUM1L1Q5H9M0 696 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ZNF790Q6PG37 636 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 OGFOD3Q6PK18 319 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KDELC1Q6UW63 502 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 RAPH1Q70E73 1250 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 NLRC3Q7RTR2 1065 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 GALNTL5Q7Z4T8 443 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ELOA2Q8IYF1 753 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PHACTR4Q8IZ21 702 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SHKBP1Q8TBC3 707 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 KIAA1524Q8TCG1 905 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 COG1Q8WTW3 980 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 RUFY2Q8WXA3 655 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 HSPBAP1Q96EW2 488 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CFAP36Q96G28 342 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PRMT6Q96LA8 375 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC74BQ96LY2 380 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 LRGUKQ96M69 825 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 IPO9Q96P70 1041 aaKnown RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 WRNIP1Q96S55 665 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TM9SF2Q99805 663 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 HAUS7Q99871 368 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 C7orf25Q9BPX7 421 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 DPH2Q9BQC3 489 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TCHPQ9BT92 498 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 DUSP23Q9BVJ7 150 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 FAM204AQ9H8W3 233 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 FANCFQ9NPI8 374 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 WASH6PQ9NQA3 447 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 TCF7L2Q9NQB0 619 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 PLSCR4Q9NRQ2 329 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 CEP72Q9P209 647 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 FNIP2Q9P278 1114 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 SLC13A4Q9UKG4 626 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 ZHX1Q9UKY1 873 aaPredicted RBP3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 R4GN57 208 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 LRRC37AA6NMS7 1700 aa3.85□□□□□ -1.79
ECHDC1-205ENST00000368295 RLFQ13129 1914 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 A0A0B4J203 849 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC69A6NI79 296 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 SRRM3A6NNA2 597 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 WDR64B1ANS9 1081 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 PYCARD-AS1I3L0S3 204 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 DNM1LO00429 736 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 TPP1O14773 563 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 TNFRSF10CO14798 259 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 HOXC11O43248 304 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CTNND1O60716 968 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 DNAJA2O60884 412 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 PARP1P09874 1014 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 MYBL2P10244 700 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 PYGMP11217 842 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 AKR1B1P15121 316 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 NME1P15531 152 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 BPIP17213 487 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CYP7A1P22680 504 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 ATP5DP30049 168 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 POLR2BP30876 1174 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 NPTX2P47972 431 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 RCAN1P53805 252 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC15Q0P6D6 951 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 BLMHQ13867 455 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 DLGAP5Q15398 846 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CFAP100Q494V2 611 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 UTP14CQ5TAP6 766 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CCDC30Q5VVM6 783 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 CDCP2Q5VXM1 449 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 LETMD1Q6P1Q0 360 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 PKN3Q6P5Z2 889 aa3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 FIP1L1Q6UN15 594 aaKnown RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 C6orf15Q6UXA7 325 aaPredicted RBP3.84□□□□□ -1.79
ECHDC1-205ENST00000368295 MFSD6Q6ZSS7 791 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms