RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 CLUHP3Q96NS8 147 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 SAMD11Q96NU1 681 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 GBP4Q96PP9 640 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 CDX2Q99626 313 aaPredicted RBP6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 OR10A5Q9H207 317 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 PCIF1Q9H4Z3 704 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 JADE2Q9NQC1 790 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 ADAMTS5Q9UNA0 930 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 RIPK3Q9Y572 518 aa6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 TNPO3Q9Y5L0 923 aaKnown RBP6.14□□□□□ -1.43
RNU4-4P-201ENST00000364588 PRUNE2Q8WUY3 3088 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 GSG1L2A8MUP6 293 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 F5H6K3 240 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 PPP1R12AO14974 1030 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CDC45O75419 566 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 MAFO75444 373 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 NDUFB10O96000 172 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CLTBP09497 229 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 AKR1A1P14550 325 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 PPP2CBP62714 309 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 PPP2CAP67775 309 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 KLRC3Q07444 240 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZNF460Q14592 562 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 TM4SF20Q53R12 229 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZMAT1Q5H9K5 638 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 C20orf194Q5TEA3 1177 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 SNRNP48Q6IEG0 339 aaKnown RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZSCAN25Q6NSZ9 544 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CC2D1AQ6P1N0 951 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 RNF180Q86T96 592 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CIR1Q86X95 450 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CPXCR1Q8N123 301 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CHMP4CQ96CF2 233 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 SCYL1Q96KG9 808 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 RBM15Q96T37 977 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 SLF1Q9BQI6 1058 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 LRRCC1Q9C099 1032 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 TTYH1Q9H313 450 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 SEC61A2Q9H9S3 476 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 SMPD4Q9NXE4 827 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 ARPP21Q9UBL0 812 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CLIP2Q9UDT6 1046 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 NRBP1Q9UHY1 535 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZHX1Q9UKY1 873 aaPredicted RBP6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 CNPY2Q9Y2B0 182 aa6.13□□□□□ -1.43
RNU4-4P-201ENST00000364588 MYADML2A6NDP7 307 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 NPEPPSL1A6NEC2 478 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 PRDM1O75626 825 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 KRT37O76014 449 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 SNAI1O95863 264 aaPredicted RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 MPIG6BO95866 241 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 COPB2P35606 906 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 TDO2P48775 406 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 SMAD3P84022 425 aaKnown RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 SBK1Q52WX2 424 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 CATSPEREQ5SY80 951 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 PIK3R6Q5UE93 754 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 OTOP2Q7RTS6 562 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 GPR155Q7Z3F1 870 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 MAFAQ8NHW3 353 aaPredicted RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 LOXL4Q96JB6 756 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 TEX13BQ9BXU2 312 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZDHHC5Q9C0B5 715 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 CHMP4BQ9H444 224 aaKnown RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 MSL2Q9HCI7 577 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 RAVER2Q9HCJ3 691 aaKnown RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 STARD7Q9NQZ5 370 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 ACSS2Q9NR19 701 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 ECHDC1Q9NTX5 307 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 FANCLQ9NW38 375 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 UCKL1Q9NWZ5 548 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 NYAP2Q9P242 653 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 RCAN3Q9UKA8 241 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 ISY1Q9ULR0 285 aaKnown RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 PLAAQ9Y263 795 aa6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 CTDP1Q9Y5B0 961 aaPredicted RBP6.12□□□□□ -1.43
RNU4-4P-201ENST00000364588 ROBO3Q96MS0 1386 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 CBX4O00257 560 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 KIAA0355O15063 1070 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 RNF113AO15541 343 aaKnown RBP6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 GPAA1O43292 621 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ADCY6O43306 1168 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 B4GALT4O60513 344 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZBED4O75132 1171 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 JMJD7P0C870 316 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 FOSL2P15408 326 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 KIF11P52732 1056 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ACLYP53396 1101 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 FPGSQ05932 587 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ACVR2BQ13705 512 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZNF174Q15697 407 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 KANK2Q63ZY3 851 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZNF444Q8N0Y2 327 aaPredicted RBP6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 ANKRD35Q8N283 1001 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 KBTBD3Q8NAB2 608 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 PRPF38AQ8NAV1 312 aaKnown RBP6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 NUP133Q8WUM0 1156 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 CEP95Q96GE4 821 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms