RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 BRD9Q9H8M2 597 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 SEC61A2Q9H9S3 476 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 MSL2Q9HCI7 577 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 STARD7Q9NQZ5 370 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 SACM1LQ9NTJ5 587 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 AFF4Q9UHB7 1163 aaKnown RBP6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 MED16Q9Y2X0 877 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 ANKRD30BQ9BXX2 1392 aa6.79□□□□□ -1.32
RNU4-39P-201ENST00000362455 TBKBP1A7MCY6 615 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 F5H423 210 aaPredicted RBP6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 TCEA3O75764 348 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 IL18RAPO95256 599 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 AMHP03971 560 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 GJB1P08034 283 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 TRAPPC10P48553 1259 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 BTKQ06187 659 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 DAG1Q14118 895 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 KIF22Q14807 665 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 EZH2Q15910 746 aaKnown RBP6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 BMT2Q1RMZ1 405 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 C3orf38Q5JPI3 329 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 FKBP15Q5T1M5 1219 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 PCSK9Q8NBP7 692 aaKnown RBP6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 NLGN4YQ8NFZ3 816 aaPredicted RBP6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 OR6B3Q8NGW1 331 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 KIAA1191Q96A73 305 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 TMEM176AQ96HP8 235 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 MSLNLQ96KJ4 702 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 LSM14BQ9BX40 385 aaKnown RBP6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 PLA2G12BQ9BX93 195 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 DPH1Q9BZG8 443 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 NELFAQ9H3P2 528 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 CERS4Q9HA82 394 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 FBXO34Q9NWN3 711 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 GPRC5BQ9NZH0 403 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 JKAMPQ9P055 326 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 CFAP97Q9P2B7 532 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 SRRDQ9UH36 339 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 PADI4Q9UM07 663 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 SLC45A2Q9UMX9 530 aa6.78□□□□□ -1.32
RNU4-39P-201ENST00000362455 SPATA31A5Q5VU36 1347 aa6.77□□□□□ -1.32
RNU4-39P-201ENST00000362455 SPATA31A7Q8IWB4 1347 aa6.77□□□□□ -1.32
RNU4-39P-201ENST00000362455 HAUS5O94927 633 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 FOSP01100 380 aaPredicted RBP6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 POMCP01189 267 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 RARBP10826 455 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 ALAS1P13196 640 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 DUSP8Q13202 625 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 DGKKQ5KSL6 1271 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 IZUMO3Q5VZ72 239 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZNF783Q6ZMS7 281 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZNF365Q70YC5 407 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 DOK3Q7L591 496 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 CCDC33Q8N5R6 958 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 SYT8Q8NBV8 401 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 POF1BQ8WVV4 589 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 MAML1Q92585 1016 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 TOX2Q96NM4 488 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 SELENOOQ9BVL4 669 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 MEGF9Q9H1U4 602 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 VPS11Q9H270 941 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 GSTO2Q9H4Y5 243 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 PPCSQ9HAB8 311 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 TRMT13Q9NUP7 481 aaKnown RBP6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 RLIMQ9NVW2 624 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 COL20A1Q9P218 1284 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 NRXN1Q9ULB1 1477 aa6.77□□□□□ -1.33
RNU4-39P-201ENST00000362455 BTN3A1O00481 513 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ABHD16AO95870 558 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 PARP1P09874 1014 aaKnown RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ABCB4P21439 1286 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 EPHB4P54760 987 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 PSMC1P62191 440 aaKnown RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 HABP2Q14520 560 aaPredicted RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 GRM7Q14831 915 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ATXN7L2Q5T6C5 722 aaPredicted RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 TAX1BP1Q86VP1 789 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 SP8Q8IXZ3 490 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 RNF152Q8N8N0 203 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 GIMAP8Q8ND71 665 aaPredicted RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 TFAP2CQ92754 450 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 NMD3Q96D46 503 aaKnown RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZC3H10Q96K80 434 aaKnown RBP6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 CRB3Q9BUF7 120 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 SMURF2Q9HAU4 748 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ARFGAP3Q9NP61 516 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 USP40Q9NVE5 1235 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 HDAC5Q9UQL6 1122 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 ARHGEF10O15013 1369 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 USP32Q8NFA0 1604 aa6.76□□□□□ -1.33
RNU4-39P-201ENST00000362455 KLRG2A4D1S0 409 aaPredicted RBP6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 TRIM43BA6NCK2 446 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 ZNF785A8K8V0 405 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 PRR5-ARHGAP8B1AHC4 643 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 LAMTOR5O43504 91 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 CREB3O43889 395 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 TBC1D4O60343 1298 aa6.75□□□□□ -1.33
RNU4-39P-201ENST00000362455 GNAI2P04899 355 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms