RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 TRIM67Q6ZTA4 783 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 TMEM121Q9BTD3 319 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 PICK1Q9NRD5 415 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 BTBD7Q9P203 1132 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 SOX13Q9UN79 622 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 SLC12A4Q9UP95 1085 aa16.71■□□□□ 0.26
CLSTN1-201ENST00000361311 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 GH1P01241 217 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 KLRK1P26718 216 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 PSMC5P62195 406 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 PDK4Q16654 411 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 NDNQ99608 321 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 CBWD1Q9BRT8 395 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 ZCWPW1Q9H0M4 648 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 DBNDD1Q9H9R9 158 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 BAG5Q9UL15 447 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 NUB1Q9Y5A7 615 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 MST1RQ04912 1400 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 DNALI1O14645 258 aaPredicted RBP16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 HSPA13P48723 471 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 SERPINB8P50452 374 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 ADRM1Q16186 407 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 RIOX1Q9H6W3 641 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 EBF2Q9HAK2 575 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 OLFML3Q9NRN5 406 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 AURKCQ9UQB9 309 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 DGKIO75912 1065 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 SSTR1P30872 391 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 PPIDQ08752 370 aaKnown RBP16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 GSTA3Q16772 222 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 EXD1Q8NHP7 514 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 AGAP1Q9UPQ3 857 aa16.7■□□□□ 0.26
CLSTN1-201ENST00000361311 SP100P23497 879 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 YWHABP31946 246 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CHKAP35790 457 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 NUDT2P50583 147 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 TFDP1Q14186 410 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 MFSD5Q6N075 450 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 MARK2Q7KZI7 788 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF720Q7Z2F6 126 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CDKL3Q8IVW4 592 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 GDPD5Q8WTR4 605 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 EZH1Q92800 747 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 COA1Q9GZY4 146 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 C20orf96Q9NUD7 363 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 ORC6Q9Y5N6 252 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CLRN2A0PK11 232 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SMNDC1O75940 238 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 PBXIP1Q96AQ6 731 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 KLHL8Q9P2G9 620 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 HERC5Q9UII4 1024 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 APPL1Q9UKG1 709 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 COMMD3-BMI1R4GMX3 469 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CLTCQ00610 1675 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 PIK3R2O00459 728 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 NOL4O94818 638 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CAMTA2O94983 1202 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 HLA-DRAP01903 254 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SRGAP2BP0DMP2 458 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SDC4P31431 198 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 RGS2P41220 211 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CASP5P51878 434 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 ADARP55265 1226 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 KRT76Q01546 638 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 RAB44Q7Z6P3 723 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF483Q8TF39 744 aaPredicted RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SPC25Q9HBM1 224 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CLIC5Q9NZA1 410 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SHOC2Q9UQ13 582 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 SNX5Q9Y5X3 404 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 NCANO14594 1321 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 FESP07332 822 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 PSMC3P17980 439 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 ACOT2P49753 483 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 OASLQ15646 514 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 MRPL1Q9BYD6 325 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 KRT82Q9NSB4 513 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 PAK5Q9P286 719 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CDY2AQ9Y6F7 541 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 CDY1Q9Y6F8 540 aa16.69■□□□□ 0.26
CLSTN1-201ENST00000361311 PPEF1O14829 653 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 AKAP10O43572 662 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CBWD2Q8IUF1 395 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 DDHD1Q8NEL9 900 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 ETS2P15036 469 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 PSEN1P49768 467 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 RPS6KA3P51812 740 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 HDAC4P56524 1084 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 PPP4CP60510 307 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 MCL1Q07820 350 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CBWD6Q4V339 395 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CBWD3Q5JTY5 395 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CBWD5Q5RIA9 395 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 CDHR1Q96JP9 859 aa16.68■□□□□ 0.26
CLSTN1-201ENST00000361311 ZNF277Q9NRM2 450 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms