RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 KPNA2P52292 529 aaKnown RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 SLC12A1Q13621 1099 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 DUOXA2Q1HG44 320 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 DALRD3Q5D0E6 543 aaKnown RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 OSBPL8Q9BZF1 889 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 FOXO6A8MYZ6 492 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 SLC37A4O43826 429 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 PEX11AO75192 247 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 GH1P01241 217 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 GPC3P51654 580 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 RNF43Q68DV7 783 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 SPATA20Q8TB22 786 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 OSGEPQ9NPF4 335 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 NAALADL1Q9UQQ1 740 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 F5H423 210 aaPredicted RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 EEF1B2P24534 225 aaKnown RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 ATXN3P54252 364 aaPredicted RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 RSPH3Q86UC2 560 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 SIX5Q8N196 739 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 CPA5Q8WXQ8 436 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 ZNF317Q96PQ6 595 aaPredicted RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 DCUN1D5Q9BTE7 237 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 MAD2L2Q9UI95 211 aa16.81■□□□□ 0.28
NPHP3-201ENST00000337331 SMG5Q9UPR3 1016 aaKnown RBP16.81■□□□□ 0.28
NPHP3-201ENST00000337331 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CDH6P55285 790 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 SEC23AQ15436 765 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 GJB7Q6PEY0 223 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 PTPRN2Q92932 1015 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 RBM15Q96T37 977 aaKnown RBP eCLIP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 PARVAQ9NVD7 372 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 KBTBD4Q9NVX7 518 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CCDC166P0CW27 439 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 COMTP21964 271 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 RPL21P46778 160 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 OCRLQ01968 901 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 GSTA3Q16772 222 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 RARS2Q5T160 578 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 ABI1Q8IZP0 508 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CAAP1Q9H8G2 361 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 ARMCX1Q9P291 453 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 GPR75-ASB3A0A0A6YYF3 556 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 WDR46O15213 610 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 FECHP22830 423 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 SKIV2L2P42285 1042 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 SNRNP35Q16560 246 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 ARL13BQ3SXY8 428 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 RWDD4Q6NW29 188 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 ANKMY2Q8IV38 441 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 VPS39Q96JC1 886 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 SERPINI1Q99574 410 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 MRPL4Q9BYD3 311 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 LRMDAQ9H2I8 198 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CYP26B1Q9NR63 512 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CPSF3Q9UKF6 684 aaKnown RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 LPXNO60711 386 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 PHKA2P46019 1235 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 GPR162Q16538 588 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 HIF1AQ16665 826 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 DSTYKQ6XUX3 929 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 CATSPER3Q86XQ3 398 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 RNF139Q8WU17 664 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 NAT14Q8WUY8 206 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 FAM118BQ9BPY3 351 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 KLHL25Q9H0H3 589 aa16.8■□□□□ 0.28
NPHP3-201ENST00000337331 FAM217BQ9NTX9 383 aaPredicted RBP16.8■□□□□ 0.28
NPHP3-201ENST00000337331 ZBBXA8MT70 800 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 ATMINO43313 823 aaPredicted RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 ITGA8P53708 1063 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 GRB10Q13322 594 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 MTM1Q13496 603 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 WDR72Q3MJ13 1102 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 DNAL1Q4LDG9 190 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 LINC00116Q8NCU8 138 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 GIPC3Q8TF64 312 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 ZNF333Q96JL9 665 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 TOPORSQ9NS56 1045 aaPredicted RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 TMEM253P0C7T8 217 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 PTENP60484 403 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 NUDCD3Q8IVD9 361 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 PURBQ96QR8 312 aaKnown RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 TMEM117Q9H0C3 514 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 ANGPTL3Q9Y5C1 460 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 PPLO60437 1756 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 LOC100653049A0A140TA62 436 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 KDM4FA0A1W2PPD8 638 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 ZSCAN9O15535 394 aaPredicted RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 KRT34O76011 436 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 OCM2P0CE71 109 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 OCMP0CE72 109 aaPredicted RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 CYP11B2P19099 503 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 IREB2P48200 963 aaKnown RBP16.79■□□□□ 0.28
NPHP3-201ENST00000337331 PRAMEP78395 509 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 IL1RL1Q01638 556 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 AP1B1Q10567 949 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 CRAMP1Q96RY5 1269 aa16.79■□□□□ 0.28
NPHP3-201ENST00000337331 PRPF18Q99633 342 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms